Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq8 237 1e-57 seq1 109 5e-19 seq5 87.8 2e-12 >seq8 Length=440579 Score = 237 bits (262), Expect = 1e-57 Identities = 981/1524 (64%), Gaps = 30/1524 (2%) Strand=Plus/Minus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || |||||||| | || || || | |||||||||| | ||| | |||||||| Sbjct 55581 ACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAG 55522 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 | |||||| || || |||||| ||||| || ||||||||| ||||| || || Sbjct 55521 CACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCATCAGCAGC 55462 Query 138628 GAATTCCGTAAACCGTGAAGCTTG--ATTCGTT-CCTTGAGCGACGACCAGTCCCACAAA 138684 || || || | |||||| || | | || || |||||||||| | ||||||||||| Sbjct 55461 GAGTTGCGCAGACCGTG---CTGGGCAATCTTTGCCTTGAGCGAGGCCCAGTCCCACAGG 55405 Query 138685 TCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCT 138744 || || | ||||||||| |||||||| | | ||| || || ||||| Sbjct 55404 TCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAGGCAGGGCTGCCC 55345 Query 138745 TCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCA 138804 ||||||| |||||| ||| | || ||||| |||| ||| ||| | || || Sbjct 55344 TCGTACGTCTCGTATGTGCCATATTCGGCCGCCAGCTCGCAGCTGCGCTCCAAGGCCGCA 55285 Query 138805 TAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGC 138864 | |||||| || || |||||| ||| |||| || ||||| ||| ||| |||| Sbjct 55284 TGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGCGCCTCCTGGCTGTCGAACGGA 55225 Query 138865 ATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGG 138924 || | ||| ||||||| ||||| || || || || || | |||| ||||| || Sbjct 55224 TAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCGATGGGGCGGTGC 55165 Query 138925 CGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTT 138984 |||| || || ||| || | ||| || ||||| | ||||||||| ||| Sbjct 55164 CGCATGTTCGAGCGACGTGCACTCTCCACAGGGTAGTAGTTGATATCGATGATGCGGTTC 55105 Query 138985 AAATT-TCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCC 139043 | || | |||| ||||| || | | | | | |||| || | |||||| | | Sbjct 55104 AGGTTCTTGCAC-ACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTGTATGT--CTTC 55048 Query 139044 GTTGTCGTCGACGACGTCGACAAATTTGTTGACA--CAAATCGAGGCTATGTTGCACACC 139101 | | | || | | || | ||| || | || |||||| || | ||||||||| Sbjct 55047 G-AGGCACCGGTGCCCTCAATAAA--CGTCGGCAGCGCAATCGACGCCAGGTTGCACACA 54991 Query 139102 GCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATC 139161 || ||||| || |||||| |||| ||| || | || | || | ||||||| Sbjct 54990 GCTGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCGTGCAGAGGTTCGAGCTCTTGATC 54931 Query 139162 GTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGT 139221 || || | || | || || || || ||||| | || ||||| || | | | || Sbjct 54930 GTGCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTGTACAGGACAAAAGGA 54871 Query 139222 GTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGA 139281 |||| || || | ||| | ||| | || | ||| | | || | | Sbjct 54870 TTGCCCGTCTCAATTTGCGCCTCGAGGATAGCGTACCACAGCTTCTGCGCCTTGACAGAG 54811 Query 139282 CGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAG 139341 ||| | | | |||||||||||||| ||||| || | || || || || ||| Sbjct 54810 CGCTTGGCGCGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCATAG 54751 Query 139342 GCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTG 139401 ||||| ||| | | |||| | | || ||||| |||||||| |||||||| | | Sbjct 54750 CAGTCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTCTGTTCG 54691 Query 139402 ACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTA 139461 || || | |||||||||||| |||||||||| || | | || |||||||| | Sbjct 54690 ACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCGCGCGCACT 54631 Query 139462 TCTTCCGAACCCATGTTACGT-TTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGG 139520 || ||| ||||| | | | || | || || ||||||||||| | |||||| || Sbjct 54630 TCCTCC-TTGCCATGGTTCTTGCGCAGATCAATAAATTCAAAAACGTCCGAGTGCCACGG 54572 Query 139521 TTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTAC 139577 ||||| ||||| || | ||||| || ||||| || || || |||| || | Sbjct 54571 CTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGC 54512 Query 139578 AGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCT-GTTCCGTTGGTGCTAC 139636 | || ||| | ||||| | ||| ||| | | |||| | ||| ||||| |||| Sbjct 54511 CGTGTTGTTGTACACGCGGAGCATGGGCACAATACCG-TTGCTCACACCGTTCGTGCCGG 54453 Query 139637 GGATGGGACTGTTGCG-AGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAAT 139695 ||| | || || || || | || || | || | || || |||||| | Sbjct 54452 CGAT-GTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAGACCAATACCGCCGGCCGTC 54394 Query 139696 TTGGATATTAAAACGCA-ATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTG 139754 ||| || | | || || | | || ||||||||||| || |||||||| Sbjct 54393 TTGCTGATCATCGCACAGGTCTTG-AGCGTGTCGTATATACCCTCGATCGAGTCGTCCTT 54335 Query 139755 CATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTT--TCGTGCCGGCTGCAAACAGA 139812 ||| | || || ||||| ||||| | ||| || ||| ||||||||| ||||| Sbjct 54334 CATACTCACAAGGAAGCACGACGACATTTGGGG--GTTGGGCGTGCCGGCATTGAACAGG 54277 Query 139813 GTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTC 139872 || || |||||| || || | | ||||| | | |||||| ||||| |||||| Sbjct 54276 GTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATGTAGTTGTACGTCTCGATCGCGCTC 54217 Query 139873 ACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCG 139932 | | ||| |||||||| ||||| | ||| ||||| ||||| || ||| || || Sbjct 54216 GCCACGTCCTCGCCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCC 54157 Query 139933 GCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTAC 139992 || ||| ||| | ||| ||| || | ||| || |||||| |||||||| | Sbjct 54156 GCAACCTTGCCATTGATCCGCAGCAGGTAGGAGCGCTCGAGCGTCTTGAAGCCAAAGAAG 54097 Query 139993 CTATAGTTGAAATCGAGCGCATAA 140016 | |||| ||| ||| || | ||| Sbjct 54096 TTGTAGTGGAAGTCGCGCTCGTAA 54073 >seq1 Length=1509180 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || || || || || || || ||||| || || | | Sbjct 1005866 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1005925 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| || ||| Sbjct 1005926 GACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1005985 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| |||||||| || |||||||||||| | | | || |||||| Sbjct 1005986 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTATAAC 1006045 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||| || |||||||||||| |||| | || || ||| Sbjct 1006046 ATTCAGAAGGAGAGCACGCTACACTTGGTGCTGCGTCTCCGTGGTGGC 1006093 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||| || ||| |||| || || || || || || || || ||||| || || | Sbjct 1005635 ACAATGCAAATTTTTGTTAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCG 1005694 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || || |||||||| ||||| || || || ||||| || Sbjct 1005695 TCGGACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGAC 1005754 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 ||||| ||| |||| |||||||| || |||||||||||| | | | || || Sbjct 1005755 CAACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTAC 1005814 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||| ||||| || || ||||||||| |||| Sbjct 1005815 AACATTCAGAAGGAGAGCACGCTGCACTTGGTGCTGCG 1005852 >seq5 Length=703599 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759 ||| ||||| | || | || || || ||||| || || || || ||||| || || | Sbjct 232056 TACCATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTC 231997 Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819 ||||||| | || | || || |||||||| ||||| || || || ||||| || Sbjct 231996 TTCCGACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGA 231937 Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879 ||||| || ||||||| ||||| || |||||||||||| | | || || || Sbjct 231936 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTA 231877 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| || || ||| | ||| |||| |||| || || Sbjct 231876 CAACATCCAGAAGGAGAGCACGCTCCACCTTGTGCTGCGCCTGCGTGGTGG 231826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897555010240