Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq8 208 1e-47 seq4 129 9e-24 seq3 114 2e-19 seq1 107 3e-17 >seq8 Length=440579 Score = 208 bits (230), Expect = 1e-47 Identities = 280/390 (72%), Gaps = 15/390 (4%) Strand=Plus/Minus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || |||||| || ||||||||||||| ||| | ||||||||||||||||||| ||||| Sbjct 54532 GCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTT 54473 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 | | | ||||| ||||| || | ||| | ||||| || || | ||||| | | Sbjct 54472 GCTCACACCGTTCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAG 54413 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 || || |||||||||| |||| ||| | ||| || | || ||||| ||||| || || Sbjct 54412 ACCAATACCGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTGAGCGTGTCGTATATACC 54353 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 ||||||||||||| ||||||| || || ||||||||||| |||| ||| | ||| Sbjct 54352 CTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGGGGGTTGGGCGT 54293 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTA 2073836 |||||||||||| || || |||| ||| || | | || | ||||||| | ||| Sbjct 54292 GCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATGTAGTTGTA 54233 Query 2073837 GGTGGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGC 2073896 || ||| | ||| ||||| |||| | | ||| | || ||||| ||| Sbjct 54232 CGTCTCGATCGCGCTCGCCA---CGTCCTCGCCGTGG--------AT----GCCGACGGC 54188 Query 2073897 GACGCGCATGATCATGTACTGGGGTCGCTC 2073926 ||||||||||| ||||| |||||| ||||| Sbjct 54187 GACGCGCATGAGCATGTGCTGGGGGCGCTC 54158 Score = 185 bits (204), Expect = 1e-40 Identities = 219/292 (75%), Gaps = 5/292 (2%) Strand=Plus/Plus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAAC-TGCCCGAGAA 794435 || || |||||||||||||||||||||||||| ||||||| | |||| ||||||||| Sbjct 42072 AGACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGG-AGGCAAACGAGCCCGAGAA 42130 Query 794436 AAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTC 794495 ||||||||||||||||||||||||| | || || ||||| | || | | | | ||| Sbjct 42131 AAAGATGCCCTCGACGGCGGCAAAGGCCACAAGGCGCTCCGAGAACGAGGC--GCGCCTG 42188 Query 794496 TTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGAT 794555 | | |||||| || |||||||| ||||| | | | || ||| | ||| ||||| Sbjct 42189 TCCG-AGATCCAGCGCAGGGCCCACTCGGCCTTCTGCTTGACGACGGGGATCGTCTCGAT 42247 Query 794556 GGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGA 794615 ||| ||||| || || |||| || || ||| ||||||||||||||||| Sbjct 42248 AGCGTTGAAGAGAAACTCACGCTGCTCCGGCTCGCGGATGTACGTGTCGATGAGGAGCGA 42307 Query 794616 GTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||| ||||| ||||||||||| || || |||||||||||| || |||||| Sbjct 42308 GTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAG 42359 Score = 174 bits (192), Expect = 2e-37 Identities = 201/268 (75%), Gaps = 6/268 (2%) Strand=Plus/Plus Query 793875 CTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAG 793934 |||| |||||| | | ||||| ||||||||||| ||| | ||||| |||||||||||| Sbjct 41699 CTCTTCGTCCTTG--GCCACGCCGGCCTTGGCATAGTCGGCAACGCGGCGCTCGAAAAAG 41756 Query 793935 TTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAG 793994 || | |||||||| ||||||||| |||||| | ||| ||||| | || |||| Sbjct 41757 TTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTTCGTCGAGTTGTAG 41816 Query 793995 TGCTTCTCGCACCCGAG--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGC 794052 |||||| | ||||| |||| ||||||||||| || || || ||||||||||||| Sbjct 41817 TGCTTCGGGTTGCCGAGGTTGACG--AGCAGGCGGTCCGCCACAAACTCAATGTACTGGC 41874 Query 794053 ACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTT 794112 |||||||| |||||||||||||| |||| || |||| | || | | ||| || | Sbjct 41875 ACATGAGGCGCGCGTTCATGCCGATCAGCGAAACAGGCAAGGCGTCAGTCAAAAAGTCCT 41934 Query 794113 TCTCGATCTCGACGGCCTCGATGATGAT 794140 ||| || | || |||||| ||||||| Sbjct 41935 GCTCAATGGCCACAGCCTCGGTGATGAT 41962 Score = 150 bits (166), Expect = 3e-30 Identities = 202/279 (72%), Gaps = 3/279 (1%) Strand=Plus/Plus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | |||||||| | || ||||| ||||||| || |||||||||| Sbjct 42354 AAGCAGCGGGCCTCGGCGGCCTGCACCTCGGCGCTGAAGCGCTCGACCAGGTTCTCGTTG 42413 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 ||||| ||||| || || || ||||| |||||||| | | |||||| ||||| | | Sbjct 42414 ACGATACCGTCCGAAGCAGCAAAGAAGGCCAGGACGTGGCTCACAAAGTGGCGCTCATTG 42473 Query 796261 TCGCTGA-GCGA--GACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317 ||| | | ||| | |||||| | | ||| |||||| | ||||||||||||| Sbjct 42474 TCGTTCATGCGGTGGTCCCAGTCGTGCAAGTCCTTCGAGAGGTCCATCTCCTCGGCGGTC 42533 Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAAC 796377 || || |||||||||||||| |||||||||| ||| ||| ||||||||||| ||||| Sbjct 42534 CAGAACGAGGCCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGGATCGGGAAG 42593 Query 796378 AGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTCG 796416 || |||||||| |||||| |||||||||||| Sbjct 42594 AGGACAAAGCGCGACTTGTTCTCCTTCAGCAGCGGCTCG 42632 Score = 138 bits (152), Expect = 2e-26 Identities = 289/433 (67%), Gaps = 8/433 (2%) Strand=Plus/Minus Query 2071584 CTCGGTGCACAGGTTGGCCGACATCGTG---GTGCCCAGGTTCTGCTGGTTGCTGGTCAG 2071640 ||| ||||| ||||| ||| || || ||||||||||||| |||||| || | | Sbjct 54958 CTCCGTGCAGAGGTT---CGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTACTCTTGCG 54902 Query 2071641 GTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGAT 2071700 ||| | | |||||||| ||| | | || |||||||| || |||||| || ||| Sbjct 54901 GTTCGCCGAGTCCTTGTACAGGACAAAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGAT 54842 Query 2071701 GGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNNNN 2071760 || |||| | | |||| || ||| | | |||||||||| Sbjct 54841 AGCGTACCACAGCTTCTGCGCCTTGACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTT 54782 Query 2071761 NNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGG 2071820 | || || ||||| | |||| | ||| || ||| || || ||||| || Sbjct 54781 CTCGTACAGAGCATCAAACTCCTCGCCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGG 54722 Query 2071821 GCAAAAGAGCGACCAGTCGCCGC-CAGTCACCACGCGGCGCATAAACAGGTCGCACGTCC 2071879 ||| | ||||||||||||||| | || | || |||||||| ||||| ||| ||| Sbjct 54721 GCACATCAGCGACCAGTCGCCGTTCTGTT-CGACACGGCGCATGAACAGATCGGGAATCC 54663 Query 2071880 ACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGT 2071939 |||| | || || |||||||| || ||||||||||| |||||||| ||| | Sbjct 54662 ACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCCATGGTTCTTGCGCAGAT 54603 Query 2071940 CGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGC 2071999 | | | || | | ||| | ||||||||||||||||||| |||||||||||| || Sbjct 54602 CAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGC 54543 Query 2072000 GCTTGCCGCCGCC 2072012 ||||| |||||| Sbjct 54542 GCTTGTTGCCGCC 54530 Score = 100 bits (110), Expect = 5e-15 Identities = 141/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 2070052 GCCGCATGGTAGATCGTCTCAAAGATGGTGC-GGTTGAGGCGACGCGCGCCGGCGCTCTC 2070110 ||||||||||| || ||||||||||| ||| || || | ||||| | ||| || Sbjct 55290 GCCGCATGGTAAATGGTCTCAAAGAT-CTGCACATTCAGCAGGCGCGCCTCCTGGCTGTC 55232 Query 2070111 CCACGGCAGGTCCATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGG 2070170 |||| | |||| || ||||| ||||| |||||||| || |||| || || || Sbjct 55231 GAACGGATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCGATGGG 55172 Query 2070171 CCGGTGGCGCAGGTTCGAGTGCCGGGC-CTCGGGCACCGGGTAGTGGTTGATGTCGATCA 2070229 ||||| |||| ||||||| | || || ||| ||| ||||||| |||||| ||||| | Sbjct 55171 GCGGTGCCGCATGTTCGAGCGACGTGCACTC-TCCACAGGGTAGTAGTTGATATCGATGA 55113 Query 2070230 CGCGGTTGAGGTT 2070242 |||||| ||||| Sbjct 55112 TGCGGTTCAGGTT 55100 Score = 100 bits (110), Expect = 5e-15 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGA 2069662 |||||||||| || || || | ||||| |||||| |||| |||||||||||| Sbjct 55589 GGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGTACG 55530 Query 2069663 CCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 2069722 ||| | |||| || ||| |||||||| ||| | |||||| |||||| |||||| Sbjct 55529 GCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCA 55470 Query 2069723 CGAGCAGCGAGTTGCGCAGGCCGTACTG 2069750 ||||||||||||||||| |||| ||| Sbjct 55469 TCAGCAGCGAGTTGCGCAGACCGTGCTG 55442 >seq4 Length=1203039 Score = 129 bits (142), Expect = 9e-24 Identities = 259/377 (69%), Gaps = 18/377 (5%) Strand=Plus/Minus Query 2175024 AAGGTGTGTGGCTGCGCGGCGGTGCGCACGGCATCGAGCGCCGTTGCCAC-GCTGCCGTC 2175082 |||| ||| ||||||| | | ||| | ||||||| ||| | |||| || |||||| Sbjct 444681 AAGGCGTGCGGCTGCGACGACGCGCGGATCGCATCGACCGC-GACGCCAATGCCGCCGTC 444623 Query 2175083 GGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGTGCACCTG 2175142 || ||| || || || | ||||| || ||| ||||| | | |||||||||| ||| Sbjct 444622 CGTAGAGTTCTTGAAGCCAATCGGCAGCGACAGGCCCGACACAAGCTCGCGGTGCAGCTG 444563 Query 2175143 GCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGCCAAATA---GGG 2175199 |||||| || |||||||| | ||||||||||| || || | || || ||| Sbjct 444562 CGACTCGGTCGTACGCGCGCCGATCGCGCCCCACGCGTACAGATCCGACAGGTACTGGGG 444503 Query 2175200 CGCCACCAAAGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTCGACGACCAGGTC 2175259 || | | | | ||| | |||| ||||| ||| |||| | ||| | ||| Sbjct 444502 CGAGATC---GTGTCGAGCACCTCGCACGCCACAGGCAGGCCAATCTCGTTAAT---GTC 444449 Query 2175260 GCGCAGCAGTCGACGCG--ATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTCGAGG 2175317 |||||| | |||| ||||| |||||| | | || |||| ||||||||| Sbjct 444448 AATCAGCAGCTGGCGCGCAATGTGC--AGGCCGCGGTTGATCTGGAACGAGCCGTCGAGG 444391 Query 2175318 TCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCG 2175377 | |||||| || ||| |||||||| |||||||||||||||||||| || | ||||| Sbjct 444390 TTCGGGTCGTTGATCAGACCCTTCCAGCCGACGGTCGTGCGCGGCTTCTCAAAGTAGGCC 444331 Query 2175378 CGC---ATGACCACCAG 2175391 ||| |||||||| || Sbjct 444330 CGCATAATGACCACAAG 444314 >seq3 Length=1354264 Score = 114 bits (126), Expect = 2e-19 Identities = 177/253 (70%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 ||||||| || | |||| |||| | || ||||||| | | ||| ||||| | | | Sbjct 504394 ACTTGGTCACCGAGCGGGTAGCCTCGGCGATGGCGTGCTTCGACAGCTCGCCAGGGAGAA 504453 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592 ||| || || || ||||||||||| || | ||| ||| | |||||| || | Sbjct 504454 TCAAACGAACAGCCGTCTGGATCTCACGCGAAGAGATGGTGCTCTTCTTGTTGTAGCTGG 504513 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652 |||| |||||||||| ||||||| |||| ||||| | || |||||||| | | Sbjct 504514 CCAGCTTCGAGGCCTCGGTGGCGATGCGCTCGAAGATGTCCTGCACGAACGAGTTGAGAA 504573 Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAA 1485712 | | ||| | ||||| ||||| || ||||||||||||||||||||| || ||| | Sbjct 504574 TGGCCATGGCCTTGTTCGAGATACCAGTGTCGGGGTGCACCTGCTTGAGGACACGGTAGA 504633 Query 1485713 CAAAGGACGAGTA 1485725 ||| |||||| Sbjct 504634 TGTAGGTCGAGTA 504646 >seq1 Length=1509180 Score = 107 bits (118), Expect = 3e-17 Identities = 345/520 (66%), Gaps = 31/520 (6%) Strand=Plus/Minus Query 653628 TCACCCGCGCCATGCGCCAGCCCGAGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAA 653687 ||| |||| | ||| | ||| ||| |||||||||| | |||||||||||||| |||| Sbjct 879582 TCATCCGCCAGACGCGGCGGCCAGAGCTGGGCGACAAGTTCTCGTCGCGCCACGGCCAAA 879523 Query 653688 AGGGCACC-GTGGGCAGCGTGCGCTCGACCGAGGAAATGCCGTGGTCGCCGCGCGGGGGC 653746 ||||| |||| | | || || || ||||| |||||| || ||| || Sbjct 879522 AGGGCGTGTGTGGTCTGATTGTGC-CGCAGGAGGACCTGCCGT--TCACCGACGACGGTA 879466 Query 653747 GCCACGCCCGACATCGTCATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAG 653806 |||| ||||||||| |||| ||||| |||| | |||||||||| ||||| | |||||| Sbjct 879465 TCCAC-CCCGACATCATCATGAACCCCCACGGCTTCCCGTCGCGTATGACGGTCGGCAAG 879407 Query 653807 ATGATGGAGGCCCTCCTG---GGCAAGG-TGGCCTGCCGCGAGGGCTACGTGGGCGACGG 653862 ||||| ||| || ||| ||||||| || || ||| |||| || |||| Sbjct 879406 ATGATCGAG---CTGCTGGCCGGCAAGGCCGGTGTG-ATCGATGGCTCGCTGCAGTACGG 879351 Query 653863 CACCCCGTTTGGCGGCGTCAC-CGTNNNNNNNNNNNNNNNNNAGTTGGCCCGCCACGGGT 653921 ||| | || |||||| || | ||| | | | ||||| | Sbjct 879350 CACGGCCTTCGGCGGC-TCGCGCGTCGAGGATATGGCCCGCATCCTCGTGCAGCACGGCT 879292 Query 653922 GCGAGCGCTAC---GGCAAGGAGGTGCTCTACCACCCGCAC-ACGGGCGAGCCCATGGAG 653977 | | |||| ||||| ||| ||| || | | |||| || || || || | ||| Sbjct 879291 ACAA---CTACGGTGGCAAAGAGTACCTC-ACGAGCGGCACGACCGGTGAACCGCTCGAG 879236 Query 653978 GCGT---TGATCTTTTCGGCGCCGGTCTACTACCAGGCCCTGCGCCACGTGGCCATCGAC 654034 |||| || |||| ||| ||| ||||||||||| || ||| ||| ||| ||| Sbjct 879235 GCGTACGTGTACTTT--GGC-CCGATCTACTACCAGAAGCTCAAGCACATGGTCATGGAC 879179 Query 654035 AAGATCCACGCCCGGCCGCGCGG-CCCCGTGCAGATGCTCACCAAGCAGCCGGTCGAGGG 654093 ||||| ||||| || ||||||| || ||||| | ||||||| |||||| |||||| Sbjct 879178 AAGATGCACGCGCGCGCGCGCGGACCGCGTGCCG-TGCTCACGCGCCAGCCGACCGAGGG 879120 Query 654094 CCGGTCGCGCTCGGGCGGCTTTCGCCTCGGAGAGATGGAG 654133 || ||| || || | || ||||| ||||||||| Sbjct 879119 ACGCAGCCGCGACGGTGGTCTGCGGCTCGGCGAGATGGAG 879080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916245549003512