Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq6 280 4e-70 seq1 114 4e-20 seq3 93.3 1e-13 seq2 87.8 5e-12 >seq6 Length=634830 Score = 280 bits (310), Expect = 4e-70 Identities = 942/1446 (65%), Gaps = 33/1446 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || ||||| ||||| || || |||||||| || || ||||| || || ||| Sbjct 329704 GCTGTTGGTATTGATTTGGGTACCACCTACTCTTGTGTGGCCGTCTGGCAGAACGACCGT 329645 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | ||||| || || || |||||| | || || || || |||||||| || ||| Sbjct 329644 GTCGAGGTCATTGCCAACGACCAGGGTAACCGTACGACTCCTTCGTACGTTGCCTTCACC 329585 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| |||| |||||| | || || || || | ||| || || | || Sbjct 329584 GACACGGAGCGTCTGATCGGTGATGCCGCCAAGAACCAGGTGGCTATGAACCCCCACAAC 329525 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACACAATC 349437 || || || || || ||||| || |||||| | ||||| | |||| || || Sbjct 329524 ACTGTCTTCGACGCCAAGCGTCTGATTGGTCGCAAGTTCAAC-GACACTGAGGTTCAGTC 329466 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGG---TGATAAACCAATTAT 349494 ||| | || || | || || | || || ||| | || ||| || |||| Sbjct 329465 GGATATGAAGCACTGGCCGTTCTCGGTCATT------GACCGCTCTGGTAAGCCCGTTAT 329412 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC--GAAGAAATTTCATCAATG 349552 || ||||| || ||||| | || || || || | || ||||| || || ||| Sbjct 329411 CCGCGTCGAATACAAGGGTGAGGAGAAG--ATCTTCACTCCTGAGGAAATCTCCTCGATG 329354 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGG-TGAAACAGTAACTGATGC 349611 || | |||| ||| || | ||||| || || | || | || || | ||||| Sbjct 329353 GTCCTGCTTAAGATGCGTGAGACCGCTGAGGCTTACCTTGGCTCGGAC-GTGAAGGATGC 329295 Query 349612 TGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGG 349671 ||| | ||||| || ||||| || || || | ||||| || || || || ||||| Sbjct 329294 TGTGGTGACTGTCCCGGCCTACTTCAACGACTCGCAGCGCCAGGCTACCAAGGACGCTGG 329235 Query 349672 CAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGC 349731 |||||||| | ||||| | | || ||||| || || || ||||| || ||||| Sbjct 329234 TGTGATTGCGGGTCTCAATGTCATGCGTATCATTAACGAGCCTACGGCTGCTGCTATTGC 329175 Query 349732 ATATGGGCTTGATAA-AATGA-GTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || || || || || | | || |||| || || ||||| || || | ||| Sbjct 329174 CTACGGTCTCGACAAGAAGGACGAGTCCGAGAAGAATGTA--CTTATCTTCGACCTGGGT 329117 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 ||||||||||| ||||| || || || || | || ||||| || || || ||||| || Sbjct 329116 GGTGGTACTTTCGATGTGTCGCTCCTGACGATCGAGGAGGGTATCTTCGAGGTTAAGGCT 329057 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || || ||||| || || |||||||| || || ||||| || ||||| || || ||| Sbjct 329056 ACCGCGGGTGACACGCACCTTGGTGGTGAGGACTTTGACAACCGTCTTGTGAACCACTTT 328997 Query 349910 GTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATC-CTAGAGCAATGC 349967 || | || || ||||| |||| || | ||| || | || | || | || ||| Sbjct 328996 GTGCAGGAGTTCAAGCG-CAAGAACAAGAAGGAT-CTGACCACAAACGCTCGTGCTCTGC 328939 Query 349968 GTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCT 350027 |||| || | ||||| | || ||||||||||| | | || || || |||| ||| Sbjct 328938 GTCGTCTGCGCACTGCTTCGGAGCGTGCTAAGCGCACTCTCTCGTCGGCTGCCCAGACCA 328879 Query 350028 CTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTC 350087 | ||||| ||||| || || ||| || | || |||| |||||||||| ||||| | Sbjct 328878 CCATTGAGATTGACTCGCTCTTTGAGGGTATTGACTTCTACACATCTATTACTCGTGCCC 328819 Query 350088 GGTTTGAAGAATTATGTATGGATCT-TTTTAGAGCAACAATGGATCCTGTGGAAAAAGTA 350146 | || || || | || || || || | | | || || || ||||| || || || Sbjct 328818 GTTTCGAGGAGCTTTGCGGTGACCTCTTCTCGCAC-ACCATTGACCCTGTCGAGAAGGTC 328760 Query 350147 TTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCT 350206 | ||||| || || ||| | | | | || | || | |||||||| || Sbjct 328759 CTCCGTGATGCCAAGATCGACAAGGGTTCGGTCAACGAGATTGTGCTGGTTGGTGGCTCG 328700 Query 350207 ACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCT 350266 || |||||||| || || || | || || || || || ||| || || Sbjct 328699 ACTCGTATTCCTCGCGTGCAGAAGCTCCTTCGCGACTTCTTCAACGGCCGCGAGCCCAAC 328640 Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTA 350326 | || || || || || || || ||||| || |||||||| || ||||| | ||| | Sbjct 328639 AAGTCTATCAACCCTGACGAGGCCGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATTCTG 328580 Query 350327 TCTGGAAATAAGAGTTC---TAAAATTGATGATCTATTACTACTAGATGTAACTCCACTT 350383 || || | | | ||| || | | ||||| | || || ||||| | || ||| Sbjct 328579 TCCGG---TGACACTTCGGAGAAGACGCAGGATCTGCTGCTGCTCGATGTCGCCCCTCTT 328523 Query 350384 TCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACT 350443 ||| | || | || || | |||| || | ||| ||| || | || | ||| Sbjct 328522 TCGATGGGTATCGAGACCGCCGGTGGTGTCTTCACTCCTCTGATCAAGCGCAACACGACT 328463 Query 350444 GTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACA 350503 || ||||| || ||||| | || || || | ||| || || ||||| | || Sbjct 328462 GTGCCTACGAAGAAGTCGGAGGTCTTCTCGACGTATGCCGACAACCAGCCTGGTGTGCTG 328403 Query 350504 ATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTT 350563 || || || || || ||||| ||||| ||||| || || || || || || | ||| Sbjct 328402 ATCCAGGTGTTCGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCTGCTGGGTAAGTTT 328343 Query 350564 ACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGAT 350623 || | ||||| || ||| | || |||||||||||||| ||| |||||||| Sbjct 328342 GAGCTTTCGGGTATTCCCCCGGCTCCTCGTGGTGTTCCTCAGATTGAGGTCACTTTCGAT 328283 Query 350624 ATTGAT 350629 | ||| Sbjct 328282 GTCGAT 328277 >seq1 Length=1509180 Score = 114 bits (126), Expect = 4e-20 Identities = 169/237 (71%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | || || || ||| || ||||| || | Sbjct 1005872 TTTGCATACCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGT 1005813 Query 140563 AATCAGATAA-TGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621 | || | ||| || || ||||| || || || || || ||||| || ||||| || || Sbjct 1005812 AGTC-GCTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGG 1005754 Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 || |||||||| || || || ||||| || || || || ||||| ||||||| || || Sbjct 1005753 TCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGAC 1005694 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || || || || | ||||| || || || || || |||||||| |||||| Sbjct 1005693 GACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCATT 1005637 >seq3 Length=1354264 Score = 93.3 bits (102), Expect = 1e-13 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291 || |||||||||| | ||||| || ||||||||||| | ||| |||||||| |||| Sbjct 1328654 ATGTAACCAGTTTCAGCTGTTTTCACAGCAGTATCAATCAGACCTTCACGACCAGCCATG 1328595 Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCT 378351 ||||||||||| |||||| | ||||| || | || | | ||| |||||| ||| ||| Sbjct 1328594 GCATGGAAGAAGAATTCATGCGCTGTAAGACCTCGAAGATACGAATTCTCAACAAAGCCT 1328535 Query 378352 C 378352 | Sbjct 1328534 C 1328534 >seq2 Length=1509484 Score = 87.8 bits (96), Expect = 5e-12 Identities = 220/333 (66%), Gaps = 5/333 (2%) Strand=Plus/Plus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || |||||||| | ||||| || || | || | | || || | ||||| ||||| Sbjct 1083890 AAGATGAAGGAGACCGCTGAGGCTTACCTGGGCCACAAGGTCACCCACGCTGTCGTTACT 1083949 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || ||||| || ||||| |||||||| || || || || || || | || || Sbjct 1083950 GTGCCGGCCTACTTCAATGACGCCCAGCGCCAGGCCACCAAGGACGCCGGTACGATCGCA 1084009 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || | | || || | || | || || ||||| || || || || || || || || Sbjct 1084010 GGTCTCGAGGTCCTCCGCATTGTGAACGAGCCCACCGCGGCTGCCATCGCCTACGGTCTG 1084069 Query 349742 GATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800 || || || ||| | || | || || | | ||| | ||||||||||| || Sbjct 1084070 GACAAGAAGGAGGGC----GAGTCGCAGATCATTGTGTATGACCTGGGTGGTGGTACCTT 1084125 Query 349801 TGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGA 349860 |||||| || || || || |||| ||| | ||||| || || || |||||||| Sbjct 1084126 TGATGTCTCGCTTCTGACCATTGACTCGGGTGTGTTTGAGGTGCTTGCTACGGCTGGTGA 1084185 Query 349861 TACACATCTTGGTGGAGAAGATTTTGATAATCG 349893 || ||||| ||||| || || ||||| || || Sbjct 1084186 CACTCATCTCGGTGGTGAGGACTTTGACAACCG 1084218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254244686424