Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01-
09] 8 sequences; 7,873,153 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq5 150 1e-31
seq1 136 3e-27
seq4 131 1e-25
>seq5
Length=703599
Score = 150 bits (166), Expect = 1e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || ||| ||||| |||||||||||||| ||||||||||| |||
Sbjct 231826 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 231885
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| ||||| ||||||| ||||| || || | |||
Sbjct 231886 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 231945
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| ||| ||||| ||| ||||| ||||| | | || ||||||| || ||||||
Sbjct 231946 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 232005
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| | || |||||||| || || |||||||| ||||| | |||||||
Sbjct 232006 TCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATG 232053
>seq1
Length=1509180
Score = 136 bits (150), Expect = 3e-27
Identities = 173/236 (73%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | || | || ||||| ||| |||||||||||||| || ||||||||
Sbjct 1005871 TTGCATACCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTA 1005812
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| || ||| | || ||||||||||| |||||||| |||| |||||| || ||
Sbjct 1005811 GTCGCTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTC 1005752
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281
| ||| | || ||||| ||| ||||| ||| || ||| | || ||||| |
Sbjct 1005751 CGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT--CAATCGTGTCCGAC 1005694
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||| | || |||||||| || ||||||||||| || || ||||||||
Sbjct 1005693 GACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCAT 1005638
Score = 134 bits (148), Expect = 1e-26
Identities = 160/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
|| ||||| ||| |||||||||||||| || ||||| || ||| || ||| | ||
Sbjct 1006078 CAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCTAAGCGTGCGGCCATC 1006019
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
||||||||||| |||||||| |||| |||||| || || | ||| | || ||||| ||
Sbjct 1006018 CTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 1005959
Query 44245 CGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302
| ||||| ||| || ||| | || ||||| | || || ||||| | || |||
Sbjct 1005958 CTGGATCTTGGCCTTGACATTGT--CAATCGTGTCCGACGACTCGACCTCGAGGGTGATC 1005901
Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || ||||||||||| || |||||||||||
Sbjct 1005900 GTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005866
>seq4
Length=1203039
Score = 131 bits (144), Expect = 1e-25
Identities = 158/213 (74%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| ||||| || ||||||||||| || |||||||| ||| || ||| |||| ||
Sbjct 406151 CACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTC 406092
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || || ||||||| |||||| || || | ||| | || ||||| |||
Sbjct 406091 GAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTG 406032
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| || ||| | || ||||| | || || ||||| | |||||||||
Sbjct 406031 GATCTTGGCCTTGACATTGT--CGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTC 405974
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| || || || ||||| |||||||||||||||
Sbjct 405973 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 405941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990364900936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |