Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq5 138 3e-27 seq4 129 1e-24 seq1 123 6e-23 >seq5 Length=703599 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || || || || || || |||||||||||||||||||| || ||| Sbjct 232049 CAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCCGAC 231990 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| || || ||||| |||||||| || || |||||||||||||| || Sbjct 231989 ACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAG 231930 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || ||||| | || || ||| || ||| || Sbjct 231929 CGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAACATC 231870 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| Sbjct 231869 CAGAAGGAGAGCACGCTCCACCTTGT 231844 >seq4 Length=1203039 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || || || ||||| ||||| ||||| || || ||| Sbjct 405945 CAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCGGAC 406004 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || |||||||||||||| || Sbjct 406005 ACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAACAG 406064 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| || || | || || ||| || ||| | Sbjct 406065 CGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAACATT 406124 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| ||||| Sbjct 406125 CAGAAGGAGAGCACCCTGCACCTTGT 406150 >seq1 Length=1509180 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || || ||||| || || ||||||||||||||||| || || ||| Sbjct 1005641 CAAATTTTTGTTAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCGGAC 1005700 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||| |||||||| || || || ||||||||||| || Sbjct 1005701 ACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 1005760 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || ||||| || ||||| || ||||| | || ||| ||| || ||| | Sbjct 1005761 CGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACAACATT 1005820 Query 178104 CAAAAAGA 178111 || || || Sbjct 1005821 CAGAAGGA 1005828 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || ||||| || || ||||||||||||||||| || || ||| Sbjct 1005869 CAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCGGAC 1005928 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||| |||||||| || || || ||||||||||| || Sbjct 1005929 ACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 1005988 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || ||||| || ||||| || ||||| | || ||| ||| |||||| | Sbjct 1005989 CGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTATAACATT 1006048 Query 178104 CAAAAAGA 178111 || || || Sbjct 1006049 CAGAAGGA 1006056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203731076617552