Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01-
09] 8 sequences; 7,873,153 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1 156 4e-33
seq4 154 1e-32
seq5 150 2e-31
>seq1
Length=1509180
Score = 156 bits (172), Expect = 4e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| |||||||||||||||||||||||||| ||||||
Sbjct 1005864 CCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1005805
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || |||||||||||||| || ||||| ||||||||||||| |||
Sbjct 1005804 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGA 1005745
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| || | || || | || | | | ||||| |||||| ||
Sbjct 1005744 ATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGAC 1005686
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || ||||| || || || || ||||| || ||||| |||||
Sbjct 1005685 CTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCAT 1005638
Score = 154 bits (170), Expect = 1e-32
Identities = 173/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | ||||| || ||||||||||||||||||||||||||||||
Sbjct 1006093 GCCACCACGGAGACGCAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCT 1006034
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| ||||| | || || |||||||||||||| || ||||| ||||||||||||| ||
Sbjct 1006033 AAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGG 1005974
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
|| || |||||||||| || | || || | || | | | ||||| |||||| |
Sbjct 1005973 AATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGA 1005915
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || ||||| || || || || ||||| || || || |||||
Sbjct 1005914 CCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005866
>seq4
Length=1203039
Score = 154 bits (170), Expect = 1e-32
Identities = 163/213 (77%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||| || ||||| |||||||||||||||||||| |||||| || ||||| |||| ||
Sbjct 406151 CACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTC 406092
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
||||||||| || ||||| ||||| ||||||||||||| || | || ||||||||||
Sbjct 406091 GAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTG 406032
Query 41773 GATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830
||| || ||| || | || | ||||| |||||| ||||| | || |||||
Sbjct 406031 GATCTTGGCCTTGACATTGTCG--ATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTC 405974
Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| || ||||| ||||| ||||| || ||||||
Sbjct 405973 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 405941
>seq5
Length=703599
Score = 150 bits (166), Expect = 2e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||| || || ||||||||||||||||| ||||| ||||||
Sbjct 231826 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 231885
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || ||||||||||||||||| ||||||||||||||||||| ||
Sbjct 231886 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 231945
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815
| | |||||||||| ||| || ||||| | | |||||| |||||||||
Sbjct 231946 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 232005
Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTA 41866
|| | || ||||| || || || || ||||| ||||| | |||||| ||
Sbjct 232006 TCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGGTA 232056
Score = 123 bits (136), Expect = 2e-23
Identities = 181/255 (71%), Gaps = 27/255 (11%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | || || |||||||||||||||||||| || || |||||
Sbjct 142049 CCACCGCGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTC 141990
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || | || || || |||||||| || || ||||||||||| ||||||| |||
Sbjct 141989 AGGGTACGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGA 141930
Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-------CTTCAACGACG------ACACAG 41798
| || |||||||||| ||| || ||| | | | || || ||||
Sbjct 141929 ATGCCCTCCTTGTCCTGGATCTTCGTCTTGACTGCGTCGTTAGCGTCGTATCACACACCA 141870
Query 41799 TG-TCGCTCGACTC--------CAC-CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTT 41848
|| ||| |||| || ||| ||||| ||| || ||||| || || || ||||||
Sbjct 141869 TGCTCGATCGAGTCGCTGCTCTCACACTCCAGCGTAATTGTTTTCCCTGTAAGTGTCTTT 141810
Query 41849 ACGAAAATCTGCATG 41863
|||||||||||||||
Sbjct 141809 ACGAAAATCTGCATG 141795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303953769600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |