Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149165.1_202017-01- 09] 8 sequences; 7,873,153 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1 156 4e-33 seq4 154 1e-32 seq5 150 2e-31 >seq1 Length=1509180 Score = 156 bits (172), Expect = 4e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| |||||||||||||||||||||||||| |||||| Sbjct 1005864 CCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1005805 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || |||||||||||||| || ||||| ||||||||||||| ||| Sbjct 1005804 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGA 1005745 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| || | || || | || | | | ||||| |||||| || Sbjct 1005744 ATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGAC 1005686 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || ||||| || || || || ||||| || ||||| ||||| Sbjct 1005685 CTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCAT 1005638 Score = 154 bits (170), Expect = 1e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| || |||||||||||||||||||||||||||||| Sbjct 1006093 GCCACCACGGAGACGCAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCT 1006034 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || |||||||||||||| || ||||| ||||||||||||| || Sbjct 1006033 AAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGG 1005974 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||||||| || | || || | || | | | ||||| |||||| | Sbjct 1005973 AATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGA 1005915 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || ||||| || || || || ||||| || || || ||||| Sbjct 1005914 CCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005866 >seq4 Length=1203039 Score = 154 bits (170), Expect = 1e-32 Identities = 163/213 (77%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || ||||| |||||||||||||||||||| |||||| || ||||| |||| || Sbjct 406151 CACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTC 406092 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||| || ||||| ||||| ||||||||||||| || | || |||||||||| Sbjct 406091 GAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTG 406032 Query 41773 GATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| || ||| || | || | ||||| |||||| ||||| | || ||||| Sbjct 406031 GATCTTGGCCTTGACATTGTCG--ATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTC 405974 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || ||||| ||||| ||||| || |||||| Sbjct 405973 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 405941 >seq5 Length=703599 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || || ||||||||||||||||| ||||| |||||| Sbjct 231826 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 231885 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||||||||| ||||||||||||||||||| || Sbjct 231886 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 231945 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||||||| ||| || ||||| | | |||||| ||||||||| Sbjct 231946 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 232005 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTA 41866 || | || ||||| || || || || ||||| ||||| | |||||| || Sbjct 232006 TCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGGTA 232056 Score = 123 bits (136), Expect = 2e-23 Identities = 181/255 (71%), Gaps = 27/255 (11%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || || |||||||||||||||||||| || || ||||| Sbjct 142049 CCACCGCGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTC 141990 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || || |||||||| || || ||||||||||| ||||||| ||| Sbjct 141989 AGGGTACGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGA 141930 Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-------CTTCAACGACG------ACACAG 41798 | || |||||||||| ||| || ||| | | | || || |||| Sbjct 141929 ATGCCCTCCTTGTCCTGGATCTTCGTCTTGACTGCGTCGTTAGCGTCGTATCACACACCA 141870 Query 41799 TG-TCGCTCGACTC--------CAC-CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTT 41848 || ||| |||| || ||| ||||| ||| || ||||| || || || |||||| Sbjct 141869 TGCTCGATCGAGTCGCTGCTCTCACACTCCAGCGTAATTGTTTTCCCTGTAAGTGTCTTT 141810 Query 41849 ACGAAAATCTGCATG 41863 ||||||||||||||| Sbjct 141809 ACGAAAATCTGCATG 141795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303953769600