Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01-
09] 8 sequences; 7,729,037 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq8 504 7e-138
seq1 136 4e-27
seq5 134 1e-26
seq4 127 2e-24
>seq8
Length=440650
Score = 504 bits (558), Expect = 7e-138
Identities = 636/865 (74%), Gaps = 19/865 (2%)
Strand=Plus/Minus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
|||||||||||| |||||| || || || | ||||| || | |||| ||
Sbjct 42582 GAGCCGCTGCTGAAGGAGAACAAGTCGCGCTTTGTCCTCTTCCCGATCCGCTACCACGAG 42523
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| ||||||||||||| ||||||| |||||||
Sbjct 42522 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGATGGACCTC 42463
Query 116696 TCCAAGGACACGAGCGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|| |||||| | ||||||||| | || |||||||||| |||||||| || | |
Sbjct 42462 TCGAAGGACTTGCACGACTGGGACCACCGCATGAACGACAATGAGCGCCACTTTGTGAGC 42403
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| |||||||| || || || ||||| |||||||||||||| |||||||||||
Sbjct 42402 CACGTCCTGGCCTTCTTTGCTGCTTCGGACGGTATCGTCAACGAGAACCTGGTCGAGCGC 42343
Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| || | | ||||||||| |||||||| || |||||||||||||| |||||| ||
Sbjct 42342 TTCAGCGCCG-AGGTGCAGGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 42284
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931
||||||| | |||||||| | ||| ||| |||||||||||||||| | ||| ||||
Sbjct 42283 GGAGAACATCCACTCGGAGACGTACTCGCTCCTCATCGACACGTACATCCGCGAGCCGGA 42224
Query 116932 GGAGAAGCTCCGTTTGT--TGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989
| || | |||| | | ||||| ||||||||||| || |||||| ||||||||
Sbjct 42223 GCAGCG--TGAGTTTCTCTTCAACGCTATCGAGACGATCCCCGTCGTCAAGCAGAAGGCC 42166
Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049
|||||||| |||||||||||| | | ||| ||| | ||| |||||||| ||||||
Sbjct 42165 GAGTGGGCCCTGCGCTGGATCTCGGACAGGCGCGCCTCGTTCTCGGAGCGCCTTGTGGCC 42106
Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109
|| || |||||||||||| |||| || |||||| || ||| |||| || |||||||||
Sbjct 42105 TTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAG 42046
Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169
|| |||||||||||||| || ||| | ||| |||||||||||||| | || |||||
Sbjct 42045 AAGCGCGGCCTCATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAGGGC 41986
Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229
||||| ||||||||||||| | ||||||| || || | || || |||| |
Sbjct 41985 CTGCACACCGACTTTGCCTGTCTCCTGTTCAGCCACCTGAAGAAG----CGTGCGCACCC 41930
Query 117230 CGCGTCAGGGA----GATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGA 117285
| ||| || ||| ||||||| || || ||||| |||||| ||| | || ||
Sbjct 41929 TGACACAGTGAACCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGACTTTTTGACTGA 41870
Query 117286 AGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGT 117344
|| |||| || ||| | || | || ||| | |||| || ||||| ||||
Sbjct 41869 CGCCTTGCCTGTTTCGCTGATCGGCATGAA-CGCGCGCCTCATGTGCCAGTACATTGAGT 41811
Query 117345 TCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACC 117404
| || || ||| | ||||| || | || | | | | |||||||||||| || | ||||
Sbjct 41810 TTGTGGCGGACCGCCTGCTCGTCAACCTCGGCAACCCGAAGCACTACAACTCGACGAACC 41751
Query 117405 CGCTGGACTTTATGAACCTCATCTC 117429
| | ||||||||| | ||||||
Sbjct 41750 CCTTCGACTTTATGGAGAACATCTC 41726
>seq1
Length=1509448
Score = 136 bits (150), Expect = 4e-27
Identities = 162/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || || || || ||||| ||||| || |||||| |||| ||||| | |
Sbjct 1005746 AATGCAAATTTTTGTTAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTC 1005805
Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|||| | || || | |||||| || || | ||||| |||||||| || ||||||
Sbjct 1005806 GGACACGATTGACAATG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 1005864
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
| || || || || | || ||||| |||||||| || | ||||| || | ||||||||
Sbjct 1005865 AACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACA 1005924
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||| ||||||||| ||||||||| | ||| ||||
Sbjct 1005925 ACATTCAGAAGGAGAGCACGCTGCACTTGGTGCTGCG 1005961
Score = 134 bits (148), Expect = 1e-26
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || ||||| ||||| || |||||| |||| ||||| | |
Sbjct 1005975 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1006034
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | || || | |||||| || || | ||||| |||||||| || |||||||
Sbjct 1006035 GACACGATTGACAATG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 1006093
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || || || | || ||||| |||||||| || | ||||| || | |||||||||
Sbjct 1006094 ACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACAA 1006153
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||| ||||||||| ||||||||| | ||| ||||
Sbjct 1006154 CATTCAGAAGGAGAGCACGCTGCACTTGGTGCTGCG 1006189
>seq5
Length=687159
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||| | ||||| || || || || || || || |||||| |||| || || | ||
Sbjct 231953 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 231894
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||| || || | ||||| ||||| ||||| |||||||
Sbjct 231893 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 231834
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| ||||| |||||||| || | ||||| || | ||||||||||
Sbjct 231833 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 231774
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| |||||| || || ||| ||||| || | || ||
Sbjct 231773 ATCCAGAAGGAGAGCACGCTCCACCTTGTGCTGCGCCTGCGTGGTGG 231727
Score = 104 bits (114), Expect = 2e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| |||||||| || |||||||||| || || |||| |||||||| || |||||
Sbjct 141685 GACAAGGAGGGCATTCCGCCGGACCAGCAGCGCCTGATCTTTGCGGGCAAGCAACTGGAG 141744
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| | || ||||| | |||||||| |||||||||||| ||||||||| || || ||
Sbjct 141745 GATGGACGTACCCTGAGTGACTACAATATCCAGAAGGAGAGCACGCTGCACCTTGTCCTG 141804
Query 40903 CG 40904
||
Sbjct 141805 CG 141806
>seq4
Length=1203632
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| || || ||| | || ||||| | |
Sbjct 406641 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 406700
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | |||||| || || | ||||| ||||||||||| |||||||
Sbjct 406701 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 406760
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| || || ||||| || |||| ||||| || | ||||||||||
Sbjct 406761 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAAC 406820
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|| ||||||||| ||| ||||| || |||
Sbjct 406821 ATTCAGAAGGAGAGCACCCTGCACCTTGTG 406850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219148478080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |