Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01- 09] 8 sequences; 7,729,037 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq4 140 3e-28 seq1 125 6e-24 seq8 105 6e-18 seq5 104 2e-17 >seq4 Length=1203632 Score = 140 bits (154), Expect = 3e-28 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| ||||||| ||||| ||||||||||| || |||||| | Sbjct 406832 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 406773 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| |||||||| || || ||||| |||||||||||||| || || || || | Sbjct 406772 GATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 406713 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||||| ||||||||| | ||| | ||| ||||| |||||||| || || Sbjct 406712 GTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGAC 406653 Query 118727 AAAAATCTGCATGGC 118741 || || |||||||| Sbjct 406652 GAAGATTTGCATGGC 406638 >seq1 Length=1509448 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | || ||||||||| | || ||| || ||||||||||| |||| Sbjct 1005975 TACCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGC 1005916 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | | ||||| |||||| ||||| || || || | || |||||||| || || |||| Sbjct 1005915 TAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAG 1005856 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||||||||| || || || || | || | ||||||| ||||| Sbjct 1005855 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGA 1005796 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||| | ||| ||||| || || || || |||||||| ||||| Sbjct 1005795 CCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCAT 1005747 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | || ||||||||| | || ||| || ||||||||||| |||| Sbjct 1006203 TACCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGC 1006144 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | | ||||| |||||| ||||| || || || | || |||||||| || || |||| Sbjct 1006143 TAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAG 1006084 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||||||||| || || || || | || | ||||||| ||||| Sbjct 1006083 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGA 1006024 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||| | ||| ||||| || || || || ||||| || ||||| Sbjct 1006023 CCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005975 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||||||| | || ||| || |||||||| || ||||| | ||||| ||| Sbjct 1006415 CAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCTAAGCGTGCGGCCATC 1006356 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || || || | || |||||||| || || ||||| |||||||||||||| Sbjct 1006355 CTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 1006296 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | || | ||||||| ||||||||||| ||| | ||| Sbjct 1006295 CTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGT 1006236 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || ||||| || ||||| Sbjct 1006235 CTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006203 >seq8 Length=440650 Score = 105 bits (116), Expect = 6e-18 Identities = 245/360 (68%), Gaps = 11/360 (3%) Strand=Plus/Minus Query 44942 ATGCCCGGACTGACGTTTAGCAACGAATTGATTTCGAGAGACGAAGGTCTGCACACCAAC 45001 ||||| || ||| |||| ||||| | || ||| | || || || ||||||||| || Sbjct 42033 ATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAGGGCCTGCACACCGAC 41974 Query 45002 TTTGCCTGCCTCTACTATAATACGAGAGTCGATCAAAAGTTGG-ACGCGCCCACCGTCAA 45060 |||||||| ||| || | | | | || || || | || | ||| || || Sbjct 41973 TTTGCCTGTCTC--CTGT--TCAGCCACCTGAAGAAGCGTGCGCACCCTGACACAGTGAA 41918 Query 45061 CGACATGTTCTCCGAAGCCGTGGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGA 45120 | ||| || |||| || |||||||| ||| ||| ||||| |||| || |||| | Sbjct 41917 CCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGACTTTTTGACTGACGCCTTGCCTGT 41858 Query 45121 ATCGTTGGTGGGAATGAACGCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCG 45180 ||| || | || ||||||||| | ||| | |||||||||||||||| || || || Sbjct 41857 TTCGCTGATCGGCATGAACGCGCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCG 41798 Query 45181 TCTTCTCGTCCAGTTAAAGTATCCCAAGATGTACTA-TACT-GA-GAACCCATTCGAGTT 45237 || |||||| | | | | ||| || | |||| ||| || |||||| ||||| || Sbjct 41797 CCTGCTCGTCAACCT-CGGCAACCC--GAAGCACTACAACTCGACGAACCCCTTCGACTT 41741 Query 45238 TATGAACAATATTTCGTTGGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATA 45297 |||| | || || ||| | ||||||| | || ||||| ||| ||||| | ||| || Sbjct 41740 TATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTA 41681 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 134412 AGAGTCTTGTAAATGCCATCGACGCTGTCGTCCTTGATGCTTTGCAGGAAACACGAACAC 134471 || || | ||| || || |||| ||||||||| || || ||||| ||||| || Sbjct 54226 AGCGTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGAC 54167 Query 134472 ATTTGTTGACGACGCGTACCCGCCGAAAACAGAGTCGGGCTCGCGTGCGTAAAGG--TGC 134529 ||||| | |||| || || ||||| ||||| |||||| ||||||| | | Sbjct 54166 ATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTC 54107 Query 134530 CCAGACTCATCAACTGATATGTTTCAATGACGCTCTTAACGTCGTCGCCGTGAATGGCCA 134589 | ||| || | | || || || || ||||| ||||| |||||||| ||| | | Sbjct 54106 TCGGAC--ATGTAGTTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGA 54049 Query 134590 GAGCGACGCGCATGAGCATGTGTTGGGGTCTCTCC 134624 |||||||||||||||||||| ||||| | |||| Sbjct 54048 CGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCC 54014 >seq5 Length=687159 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||| | ||||| || ||| || || |||||||| ||||||| ||||| ||| Sbjct 231741 CAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATC 231800 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || || ||| |||| || ||||| || || ||||| || ||||||||||| Sbjct 231801 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTC 231860 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | |||| ||||| | ||| ||||||| ||| | ||| Sbjct 231861 CTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGT 231920 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 || ||||| || || || || || | ||||||| Sbjct 231921 CTTCCCGGTAAGGGTCTTGACGAACACTTGCATGG 231955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830357701536