Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01-
09] 8 sequences; 7,729,037 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq1 123 3e-23
seq4 118 1e-21
seq5 95.1 1e-14
>seq1
Length=1509448
Score = 123 bits (136), Expect = 3e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| |||||| |||| ||||||||||| ||||| ||||| || || || || |
Sbjct 1006190 ACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCC 1006131
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || |||||||| || || || || || ||||| ||||| | || | || ||||||
Sbjct 1006130 ATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTT 1006071
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
|||| ||| || |||| | | | |||||| ||| || || |||| |||||
Sbjct 1006070 GTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGAT 1006011
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| ||||| || || ||||| ||||||||||||||
Sbjct 1006010 CGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005975
Score = 122 bits (134), Expect = 1e-22
Identities = 157/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| |||||| |||| ||||||||||| ||||| ||||| || || || || |
Sbjct 1005962 ACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCC 1005903
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || |||||||| || || || || || ||||| ||||| | || | || ||||||
Sbjct 1005902 ATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTT 1005843
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
|||| ||| || |||| | | | |||||| ||| || || |||| |||||
Sbjct 1005842 GTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGAT 1005783
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|| ||||| || || ||||| ||||| |||||||||
Sbjct 1005782 CGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCATT 1005746
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| |||||| || | ||||||||||| ||||| || || || || || || |
Sbjct 1006418 ACGCAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCTAAGCGTGCGGCC 1006359
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || |||||||| || || || || || ||||| ||||| | || | || ||||||
Sbjct 1006358 ATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTT 1006299
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
|||| ||| || |||| | | | |||||| ||| || || |||| |||||
Sbjct 1006298 GTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGAT 1006239
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| ||||| || || ||||| ||||||||||||||
Sbjct 1006238 CGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006203
>seq4
Length=1203632
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040
|||| ||||||||||| ||||| ||||| || ||| || || |||| || ||||||
Sbjct 406843 TGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGC 406784
Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100
||||||||||| || || ||||| ||||| | || | || |||||||||| ||| ||
Sbjct 406783 TTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTG 406724
Query 43101 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 43160
|||| | | | |||||| ||| || || || | || || || ||||| ||
Sbjct 406723 GCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTC 406664
Query 43161 AGCGTCTTTACAAAGATTTGCAT 43183
|| ||||| || |||||||||||
Sbjct 406663 AGAGTCTTGACGAAGATTTGCAT 406641
>seq5
Length=687159
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028
|||| ||| | || | ||||||||||| || || ||||| || ||| || || |
Sbjct 231739 CGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCA 231798
Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088
|| || |||||||| || ||||| || || ||||| ||||| | || | | |||||||
Sbjct 231799 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTG 231858
Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148
||| ||| || || | || | | ||||||| || ||||| |||| |||||
Sbjct 231859 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATC 231918
Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || || || || ||||| || || | ||||||
Sbjct 231919 GTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 231953
Score = 86.0 bits (94), Expect = 7e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| || | |||| ||||||||||| || |||||||| ||| ||| || || |
Sbjct 141807 ACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTACGTCC 141748
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || || ||||| || || || || || ||||||||||| | ||| | || ||||||
Sbjct 141747 ATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTT 141688
Query 43088 GTCCATGATTTT 43099
|||| ||| ||
Sbjct 141687 GTCCTGGATCTT 141676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571817542818240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |