Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01- 09] 8 sequences; 7,729,037 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq8 477 9e-130 seq4 116 3e-21 seq1 96.9 3e-15 >seq8 Length=440650 Score = 477 bits (528), Expect = 9e-130 Identities = 1249/1880 (66%), Gaps = 46/1880 (2%) Strand=Plus/Minus Query 22107 TGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCG 22166 ||||||| || ||||| || || | || ||||| ||||| | || ||| ||||| Sbjct 55791 TGTCCACAGTGAACTGGATCGCCTGCGCAGCCGGGCGTGTGCGCAAGTAGTACGAGCCCG 55732 Query 22167 TCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCA 22226 |||| |||||| | ||||| ||||||| || |||||||| | | ||| | ||||| Sbjct 55731 TCTTGAGACCCTTTTTCCAGCCGTAAAAGTGCATCGACGTAAGCTGACCAAACGTCGGCG 55672 Query 22227 AGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCA 22286 | || || | |||| ||| ||||| | ||| || || || || ||||||| Sbjct 55671 CGCTCAGGTGGATGTTGAGACTCTGGCTCTGGCACACAAAGGCGCCACGGTCTGCGGCCA 55612 Query 22287 TATTTATCAATGTACGCATC-GAC--ATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 ||| | ||| || | || | | || ||||| || |||||||| || | |||| | Sbjct 55611 TATCGAG-AATC-AC-CTTCTGGCTGATCTCCCACACAGTCTTGTAGAGGGCCTTGATGT 55555 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403 || || |||| |||||| || ||| || || ||| | || | Sbjct 55554 GGTCAGGGATGCCAGCGATGTTCTGGATTGAGCCGCCATGCGCAATAATCTTCTGCTTCA 55495 Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463 ||| || ||||| | || | || | || | ||| |||| ||||| | Sbjct 55494 TCGAGTCATTCCAGAGGCCCAGCTCGACAAGCTCGCGCAGCAGCCACGGGTTGACCACCT 55435 Query 22464 GAAACTCGCCGGACAAG-ACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522 | ||||| |||| |||| || ||||| |||||||||| ||| |||| || || | Sbjct 55434 GGAACTCACCGG-CAAGCACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAGCAC 55376 Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582 || ||| || || |||||| || || || |||||||| ||||||| ||| |||||| Sbjct 55375 TCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCATCAGCAGCGAG 55316 Query 22583 TTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGAC 22642 || | || ||||||| | ||| || ||||||| | |||||||||||| || ||| Sbjct 55315 TTGCGCAGACCGTGCTGGGCAATCTTTGCCTTGAGCGAGGCCCAGTCCCACAGGTCCGAC 55256 Query 22643 GGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGGCTGCCTT 22700 ||||| || |||||| ||||| |||| | ||| |||| || |||||||| | Sbjct 55255 GGCGTGCGGTT---CCACATGTCGTACTGCAGGAGGCCCTGCGAG--GCAGGGCTGCCCT 55201 Query 22701 CGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGT 22760 ||||||| ||||| | |||||| || || || |||||||| |||||| || | | Sbjct 55200 CGTACGTCTCGTATGTGCCATATTCGGCCGCCAGCTCGCAGCTGCGCTCCAAGGCCGCAT 55141 Query 22761 AATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GCGGCGACGCTTTCGTACGGC 22819 || || ||||| ||||| | | |||| |||| || | ||| ||| |||| Sbjct 55140 GGTAAATGGTCTCAAAGATCTGCACATTCAGCA-GGCGCGCCTCCTGGCTGTCGAACGG- 55083 Query 22820 ATA-CGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTT 22878 ||| | ||| |||| |||||| || || | ||||| || || |||||||| || |||| Sbjct 55082 ATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCGATGGGGCGGTG 55023 Query 22879 TTTCAGATTCGACACTTTTGC-CTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGT 22937 || ||||| ||| ||| || ||| || | || |||||| | | || Sbjct 55022 CCGCATGTTCGAGCGACGTGCACTCTC-CACAGGGTAGTAGTTGATATCGATGATGCGGT 54964 Query 22938 TCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAA------- 22990 ||| ||| || ||| | ||||| | | |||| ||| Sbjct 54963 TCAGGTTCTTGCACACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTGTATGTCTTCG 54904 Query 22991 ACGCCCGATTGTAC--AACAAACTTGTTGACGGCG--ATCGAGGCAAGATTGCATACGGC 23046 | || | || | || |||| || | | ||| ||||| || || ||||| || || Sbjct 54903 AGGCACCGGTGCCCTCAATAAAC--GTCGGCAGCGCAATCGACGCCAGGTTGCACACAGC 54846 Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGT 23106 |||||| || ||||||| | ||| || || || || || | ||| ||||| Sbjct 54845 TGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCGTGCACAGGTTCGAGCTCTTGATCGT 54786 Query 23107 GCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGT 23166 ||||| || ||||||| || || || || ||| |||||||| || | | || | Sbjct 54785 GCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTGTACAGGACAAAAGGATT 54726 Query 23167 GCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCG 23226 ||||||||| | |||| ||||| ||| || ||||| |||| || | ||| || Sbjct 54725 GCCCGTCTCAATTTGCGCCTCGAGGATAGCGTACCACAGCTTCTGCGCCTTGACAGAGCG 54666 Query 23227 CACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACA 23286 | | | ||| || ||||||||| | ||||| || ||||| || | || || || Sbjct 54665 CTTGGCGCGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCATAGCA 54606 Query 23287 GTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAAC 23346 ||| ||||| || || | | || ||||| || ||| || | ||| || Sbjct 54605 GTCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTCTGTTCGAC 54546 Query 23347 GCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTC 23406 || | ||| || ||||| || ||||| || || |||||| ||||| |||||||| || Sbjct 54545 ACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTC 54486 Query 23407 CTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTC 23466 ||| ||||| |||||| || ||| | ||| || || ||||||| ||||||||||| Sbjct 54485 CTCCTTGCCATGGTTCTTGCGCAGATCAATAAATTCAAAAACGTCCGAGTGCCACGGCTC 54426 Query 23467 GAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGT 23526 ||||| | ||||| |||||||| | ||| ||||||||||| || ||||| || ||||| Sbjct 54425 CAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGT 54366 Query 23527 GTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCAC 23586 |||||||||||| | ||||| ||||| | ||||||| | | ||| ||| || | Sbjct 54365 GTTGTTGTACACGCGGAGCATGGGCACAATACCGTTGCTCACACCGTTCGTGCCGGCGAT 54306 Query 23587 ACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGA 23646 ||| || | || |||| |||||| | || | ||| || || ||| ||| || Sbjct 54305 GTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAGACCAATACCGCCGGCCGTCTTGCT 54246 Query 23647 TATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGC 23706 |||||||| || || || |||||||| || |||||||| ||| || || | Sbjct 54245 GATCATCGCACAGGTCTTGAGCGTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACT 54186 Query 23707 GACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCT 23766 || | ||| ||||| |||||||| | |||||||| |||| |||||| ||||| Sbjct 54185 CACAAGGAAGCACGACGACATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGA 54126 Query 23767 GGCGTGCGTAAAGTATCCAT-TC-GACAT-TAGATTGTACGTGTCGATGGCGGCATCAAT 23823 ||||| |||||| || | || ||||| ||| |||||||| ||||| ||| | | Sbjct 54125 CGCGTGTGTAAAG--GCCTTCTCGGACATGTAG-TTGTACGTCTCGATCGCGCTCGCCAC 54069 Query 23824 GTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT---CGAC 23880 |||||| ||||| || |||| |||||||||||| | ||||| || || | || | || Sbjct 54068 GTCCTCGCCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCCGCAAC 54009 Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940 | | ||| || || | ||| || || || | | ||| || || ||||| ||| Sbjct 54008 CTT---GCCATTGATCCGCAGCAGGTAGGAGCGCTCGAGCGTCTTGAAGCCAAAGAAGTT 53952 Query 23941 ATAGTTAAAGTCACGATCGT 23960 |||| ||||| || |||| Sbjct 53951 GTAGTGGAAGTCGCGCTCGT 53932 Score = 219 bits (242), Expect = 4e-52 Identities = 579/872 (66%), Gaps = 39/872 (4%) Strand=Plus/Minus Query 57540 TTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCA 57599 |||||| | || ||||| || | || || ||| | |||||||| ||||| || || Sbjct 42552 TTTGTCCTCTTCCCGATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCC 42493 Query 57600 TCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTC 57659 ||||| ||||||| ||| || | ||||| || ||||| || ||| ||||| || | Sbjct 42492 TCGTTCTGGACCGCCGAGGAGATGGACCTCTCGAAGGACTTGCACGACTGGGACCACCGC 42433 Query 57660 A---AAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGAT 57716 | | || |||| | | ||| | | ||||| |||| || || || || || || Sbjct 42432 ATGAACGACAATGAGCGCCACTTTGTGAGCCACGTCCTGGCCTTCTTTGCTGCTTCGGAC 42373 Query 57717 GGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCG 57776 ||||| || |||||||| ||||||| | || || ||||| | | ||||| Sbjct 42372 GGTATCGTCAACGAGAACCTGGTCGAGCGCTTCAGCGCCGAGGTGCAGGCCGCCGAGGCC 42313 Query 57777 AGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTA 57836 | ||||| ||||| || || | || || ||| | || || || | ||| ||||| Sbjct 42312 CGCTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGCTC 42253 Query 57837 CTCATCGATACGTACGTGAAGGACAACGACGAGAAACGT-AGA--CTGTTCAACGCGATC 57893 |||||||| |||||| | || || ||| | ||| || || |||||||| ||| Sbjct 42252 CTCATCGACACGTACATCCGCGAGC-CG--GAGCAGCGTGAGTTTCTCTTCAACGCTATC 42196 Query 57894 GAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATCAAATGGATA----AA 57946 || || || |||| ||| |||| ||||| |||||| | | ||||| | Sbjct 42195 GAGACGATCCCCG---TCGTCAAGCAGAAGGCCGAGTGGGCCCTGCGCTGGATCTCGGAC 42139 Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006 | |||| ||| ||||| | ||| | || | || || ||||||||||| || || || Sbjct 42138 AGGCGC----GCCTCGTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGCATCTT 42083 Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066 || |||||| ||||| | || || ||| | ||||| |||||||| ||||| || || Sbjct 42082 TTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCT 42023 Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 | |||| |||||| | || |||||||| ||||| || || || || ||||| || || Sbjct 42022 GTCGTTCTCGAACGAGCTCATCTCGCGCGATGAGGGCCTGCACACCGACTTTGCCTGTCT 41963 Query 58127 AATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGA---CATTATCAC 58183 ||| | ||| | || || | ||| | || || | ||| ||||| Sbjct 41962 CCTGTTCAGCCAC---CTGAAGAAGCGTGCGCACCCTGACACAGTGAACCGCATCATCAC 41906 Query 58184 CGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGG 58243 |||||| || || || || | || ||| | || || ||| | || || | || |||| Sbjct 41905 CGAGGCTGTGGCCATTGAGCAGGACTTTTTGACTGACGCCTTGCCTGTTTCGCTGATCGG 41846 Query 58244 TATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCG- 58302 |||||| | |||| |||||||||||||||| || ||| | | |||||| Sbjct 41845 CATGAACGCGCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCC---TGCTCGT 41789 Query 58303 -AACTGATTGGAGA---GCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTG 58358 ||| | || | | || |||||| ||| || || || || |||||| | Sbjct 41788 CAAC--CTCGGCAACCCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAAC 41731 Query 58359 ATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 ||||||||| |||||||| | ||||||||||| Sbjct 41730 ATCTCGCTCCAGGGCAAGTCGAACTTTTTCGA 41699 >seq4 Length=1203632 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||||||||| ||||| ||||| ||| | || || || |||| Sbjct 406640 CATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTC 406699 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| | || ||||||||| ||| | || || ||||| Sbjct 406700 GGACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCA 406759 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||| || |||||||| || ||| | || ||| | || ||||||| || || Sbjct 406760 ACAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAA 406819 Query 31372 CATTCAAAAAGA 31383 |||||| || || Sbjct 406820 CATTCAGAAGGA 406831 >seq1 Length=1509448 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| || || ||||| ||||||||| |||| || || |||| Sbjct 1005747 ATGCAAATTTTTGTTAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1005806 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||||||| ||| | || || ||||| Sbjct 1005807 GACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1005866 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||| ||| |||| || || | ||||| || ||| Sbjct 1005867 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACAAC 1005926 Query 31373 ATTCAAAAAGA 31383 ||||| || || Sbjct 1005927 ATTCAGAAGGA 1005937 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| || || ||||| ||||||||| |||| || || |||| Sbjct 1006203 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1006262 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||||||| ||| | || || ||||| Sbjct 1006263 GACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1006322 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||| ||| |||| || || | ||||| |||||| Sbjct 1006323 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTATAAC 1006382 Query 31373 ATTCAAAAAGA 31383 ||||| || || Sbjct 1006383 ATTCAGAAGGA 1006393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766355423360