Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01-
09] 8 sequences; 7,729,037 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 7e-17
seq5 87.8 2e-12
seq8 84.2 2e-11
>seq1
Length=1509448
Score = 102 bits (112), Expect = 7e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| || || | ||||| || |||| ||| |||| |||||| |
Sbjct 1006203 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1006262
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | ||||| ||||| ||||| || ||||| ||||| || |||
Sbjct 1006263 GACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1006322
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||||| | ||||||||| || || |||| | | | | ||||| ||||||
Sbjct 1006323 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTATAAC 1006382
Query 24171 ATTCAAAAAGA 24181
||||| || ||
Sbjct 1006383 ATTCAGAAGGA 1006393
>seq5
Length=687159
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||||||||| || || || | || || || |||| ||| |||| || ||| | |
Sbjct 231953 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 231894
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| |||||| | || || ||||| ||||| || || || ||||| || |||
Sbjct 231893 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 231834
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||| | || ||||||||| || || |||| | | | ||||| || |||
Sbjct 231833 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 231774
Query 24171 ATTCAAAAAGA 24181
|| || || ||
Sbjct 231773 ATCCAGAAGGA 231763
>seq8
Length=440650
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 104611 TCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAAGGATTCAAA 104670
|| ||||| || | |||||||| || || || || | |||||| ||||| || |||
Sbjct 41699 TCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTTCGTC 41758
Query 104671 GTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCACAAATTCGATG 104730
| || | | || || ||| || | || | ||| || ||||||||||| || |||
Sbjct 41759 GAGTTGTAGTGCTTCGGGTTGCCGAGGTTGACGAGCAGGCGGTCCGCCACAAACTCAATG 41818
Query 104731 TACTCGCACATAGAATGTGCATTCATGCCCAGCATTGCGACGGGTAAAGCGTTAGTaaaa 104790
|||| |||||| | || |||||||| | || | || || || |||| ||| |||
Sbjct 41819 TACTGGCACATGAGGCGCGCGTTCATGCCGATCAGCGAAACAGGCAAGGCGTCAGTCAAA 41878
Query 104791 aaaTCTTTCTCGATGTCCACGGCTTC 104816
|| || | ||| ||| |||| || ||
Sbjct 41879 AAGTCCTGCTCAATGGCCACAGCCTC 41904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935958081240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |