Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01- 09] 8 sequences; 7,729,037 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq8 167 5e-36 seq3 116 8e-21 >seq8 Length=440650 Score = 167 bits (184), Expect = 5e-36 Identities = 398/592 (67%), Gaps = 11/592 (2%) Strand=Plus/Plus Query 251554 ACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAG 251613 || ||||| ||||| || || |||||||||| || ||||| |||||| ||||||||| Sbjct 41690 ACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAG 41749 Query 251614 GGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACA 251673 ||||| || | ||||| ||||| || | ||| || |||| | |||||| |||||| Sbjct 41750 GGGTTCGTCGAGTTGTAGTGCTTCGGGTTGCCGAGGTTGACGAGCAGGCGGTCCGCCACA 41809 Query 251674 AACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGC 251732 ||||| | ||||| | ||| || | ||||||||| |||| ||| | ||| | || Sbjct 41810 AACTCAATGTACTGGCACATGAGGCGCGCGTTCATGCCGATCA-GCGAAACAGGCAAGGC 41868 Query 251733 CTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGC 251792 ||| | || |||| || |||| || ||||| | || |||| ||||| Sbjct 41869 GTCAGTCAAAAAGTCCTGCTCAATGGCCACAGCCTCGGTGATGATGCGGTTCA-CTGTGT 41927 Query 251793 CAGAGACAGCTTG-TTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGAC 251851 ||| | || | |||| ||| | | ||||||| | |||| | |||||| | Sbjct 41928 CAGGGTGCGCACGCTTCTTCAGGTGGCTGAACAGGAGACAGGCAAAGTCGGTGTGCAGGC 41987 Query 251852 CCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCC 251911 |||| ||||| ||||| |||||| || | ||| |||||||| | || || ||| Sbjct 41988 CCTCATCGCGCGAGATGAGCTCGTTCGAGAACGACAGACCAGGCATGAGGCCGCGCTTCT 42047 Query 251912 TGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATG 251971 ||||||||||||| | | ||| || || ||||| | | |||||||| | | | Sbjct 42048 TGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGG 42107 Query 251972 CAACAAGGCGCTCAGCAAACGACTTG-TCCTG--CGACAAGAACTTCTGTGCCCATGCTG 252028 | ||||||||||| | ||||| | |||| ||| | | | | ||||| | | Sbjct 42108 CCACAAGGCGCTCCGAGAACGAGGCGCGCCTGTCCGAGATCCAGCGCAGGGCCCACTCGG 42167 Query 252029 CCTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCAT 252088 |||||| || ||||||| || ||||| || | |||||| | | |||| || Sbjct 42168 CCTTCTGCTTGACGACGGGGATCGTCTCGATAGCGTTGAAGAGAAACTCACGCT--GCTC 42225 Query 252089 CG--TCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138 || || |||| || || | ||||| |||||| ||||||| |||||| Sbjct 42226 CGGCTCGCGGATGTACGTGTCGATGAGGAGCGAGTACGTCTCCGAGTGGATG 42277 >seq3 Length=1353617 Score = 116 bits (128), Expect = 8e-21 Identities = 397/613 (65%), Gaps = 18/613 (3%) Strand=Plus/Minus Query 218402 GCGAGCTCATCGACCGATCTTTCAACAAGTCTCGTCCTGATGAGCGCAAGACCTGGCTGC 218461 |||| ||| |||||| | ||||||||| | || || |||||| ||||||| Sbjct 276051 GCGATCTCGTCGACCTGGCCTTCAACAAGAAGAAGGCGGACGACCGCAAGGAGTGGCTGC 275992 Query 218462 TCGACTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAGAC-CAACATCCCCGTCCCTGAC 218520 | | ||| ||| || | | | ||||||| || | | | | |||||| || | ||| Sbjct 275991 GCCAGTTCGTGCCGGGCACCTACCTGGACCAC-CGCATCCGCCAGATCCCCATCTCGGAC 275933 Query 218521 TTCATCGACAAGGAGCTCATTCTTTTCTC----GCGGTATGATGTGGAGCGTTCTATTCC 218576 || ||| |||||||||| || || ||||| |||| | || | || || || || Sbjct 275932 TTTATCAACAAGGAGCTGATCCTCTTCTCCATGGCGG-ACAATATC---CGCTCGATCCC 275877 Query 218577 CAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCG 218636 |||||||| || ||||||||||| ||||| ||| |||| || | |||||||| Sbjct 275876 GAGCGTGGTCGACGGCCTCAAGCCGGGCCAGCGCAAGGTCCTGTTCGGTTGCTTCAAGCG 275817 Query 218637 GAACCTGGTTCAA----GAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTT 218692 |||| |||| ||||| ||||| ||| | ||||| || || || Sbjct 275816 TAACC----TCAAGACGGAAATCAAGGTGCAGCAGCTGCAGGGTTACGTGTCGGAGCACA 275761 Query 218693 CTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACT 218752 | | || || ||||| || ||||||||| | ||||| ||| | || ||||||| Sbjct 275760 CGGCGTATCACCACGGCGACCAGAGTCTGGTAATGACGATTGTGGGCCTTGCGCAGGACT 275701 Query 218753 ATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTAT 218812 | ||||| |||||| |||| |||| | |||||||| || || || | || Sbjct 275700 TTTGCGGCAGCAACAACGTGAATATGCTCATGCCCAACGGCCAATTCGGCACGCGCAGCA 275641 Query 218813 TGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGC 218872 |||| || ||||| || ||| | || || || || || ||| | | |||| Sbjct 275640 TGGGCGGCAAGGACGCGGCGAGCGCCCGTTACATTTTCACGGCCGTGCCGCGCATCACGC 275581 Query 218873 GCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTT 218932 ||||| | ||| | | | || || | ||||| || || || || || || || Sbjct 275580 GCCAGCTCTTCCACCCGAAGGACGACGCACTCCTCAACTACCTCGACGAGGACGGGCAGA 275521 Query 218933 CGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATG 218992 || |||||||||||||| || || | | ||| |||| | || || ||| | | Sbjct 275520 GCATCGAGCCCGAGTGGTACGTCCCGGTCGTGCCGCAGGTGCTGCTCAACGGCGCCGACG 275461 Query 218993 GTATCGGGACAGG 219005 ||||||| || || Sbjct 275460 GTATCGGCACGGG 275448 Score = 105 bits (116), Expect = 1e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || ||||| |||||| ||||| | |||||||| || || |||| ||||||||||| ||| Sbjct 396296 GGCGAGGACCTGTGTAACTGTCAGTTCTCGCTGGCCTACGGTGCCAAGATTCTGCTGAAC 396237 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | || ||| | ||||||||||| |||| || |||||| |||| || || | Sbjct 396236 ACCGCCACCCTGCGCCTCAAGCGTGGCCACCGCTACGGTCTCTGTGGTCGTAACGGTTCC 396177 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 |||||| || || ||||||||||| ||||| ||| | | ||| |||| ||| Sbjct 396176 GGTAAGTCGACCCTGATGCGCGCCATCCAGAACGGCCAGGTCG-AGGGCTTCCCGTCGCC 396118 Query 279525 T-CTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 | ||||| | || ||| || ||||||||| ||||| Sbjct 396117 TGAGGAGGTCCGCACCTGGTACGTCGAGCACGACCTCGAC 396078 Score = 96.9 bits (106), Expect = 7e-15 Identities = 138/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 |||||||||||||||||||||||||| ||||| | || ||| | || | ||||| Sbjct 395942 CTGTCGGGTGGTTGGAAGATGAAGCTCGCCCTGGCCCGTGCCGTGCTGTTCAAGGCCGAC 395883 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 | || ||||| |||||||| ||||||||| ||||| | |||||| |||||| | | Sbjct 395882 ATTCTGCTGCTCGATGAGCCGACCAACCACTTGGACGTGATCAACGTGGCCTGGATCACG 395823 Query 279825 TCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTC 279884 |||||| || | | ||| | | || ||||||| || |||||||| ||| Sbjct 395822 AACTACCTGTGCACT---ACGAACGCCACCTCGATCATTGTGTCGCACGACTCCAAGTTC 395766 Query 279885 CTAGATGCCGTGTG 279898 || | | |||||| Sbjct 395765 CTGAACGACGTGTG 395752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836694646728