Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01-
09] 8 sequences; 7,729,037 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq4 125 6e-24
seq1 113 4e-20
seq5 91.5 1e-13
>seq4
Length=1203632
Score = 125 bits (138), Expect = 6e-24
Identities = 144/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251
|| || ||||||||||| ||||||| || ||| || || || || ||||||||| ||
Sbjct 406831 TCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAG 406772
Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311
|| |||||||||||||||||||| ||||| || ||||| ||||| || | |
Sbjct 406771 ATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 406712
Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371
|| | ||||| | || ||||| || | ||| | ||| ||||| |||||||| || ||
Sbjct 406711 TCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGACG 406652
Query 114372 AAAATCTGCATGGC 114385
|| || ||||||||
Sbjct 406651 AAGATTTGCATGGC 406638
>seq1
Length=1509448
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | || || || || | ||| || || ||||||||||| |||
Sbjct 1005976 ATACCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG 1005917
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| | || || ||| || || || || || || | || ||||||||||||||||||
Sbjct 1005916 CTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGA 1005857
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || ||||| ||||| || | | |||| ||||| | || |||
Sbjct 1005856 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCG 1005797
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | ||| ||||| || || || || |||||||| |||||
Sbjct 1005796 ACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCAT 1005747
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | || || || || | ||| || || ||||||||||| |||
Sbjct 1006204 ATACCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG 1006145
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| | || || ||| || || || || || || | || ||||||||||||||||||
Sbjct 1006144 CTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGA 1006085
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || ||||| ||||| || | | |||| ||||| | || |||
Sbjct 1006084 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCG 1006025
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | ||| ||||| || || || || ||||| || |||||
Sbjct 1006024 ACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005975
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| ||||| || | || || || |||| ||| || || |||||||| || |||||
Sbjct 1006429 CCACCACGGAGACGCAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCTA 1006370
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| || || ||| || || || || || || | || |||||||||||||||||||||
Sbjct 1006369 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGA 1006310
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
||||| || ||||| ||||| || | | |||| ||||| | || |||||
Sbjct 1006309 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACC 1006250
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | ||| ||||| || || || || ||||| || |||||
Sbjct 1006249 TCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006203
>seq5
Length=687159
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251
|| || || |||||||| ||||||| || ||| ||| || || || || || ||| ||
Sbjct 231763 TCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAG 231822
Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311
|| || ||||||||||||||||| || || || ||||| ||||| || | |
Sbjct 231823 ATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTC 231882
Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371
|| | ||||||| || || || || | ||| | ||| || ||||| || || || ||
Sbjct 231883 TCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACG 231942
Query 114372 AAAATCTGCATGG 114384
|| | |||||||
Sbjct 231943 AACACTTGCATGG 231955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134359036896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |