Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01-
09] 8 sequences; 7,729,037 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 6e-17
seq5 96.9 3e-15
>seq1
Length=1509448
Score = 102 bits (112), Expect = 6e-17
Identities = 158/222 (71%), Gaps = 8/222 (4%)
Strand=Plus/Minus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968
|| |||||||||| || |||||||||||||||||||||||||| || || || || ||
Sbjct 1006192 AGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCG 1006134
Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028
| || |||| |||||||||||||| ||||| ||||| || ||| || | || |||
Sbjct 1006133 GCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTC 1006074
Query 34029 TTTGTCCATAATTTTTTGCTT---AATGGAACTCACACTATCAGTAGATTCGCATTCGAC 34085
|||||| || || ||| | || | || | || | || ||| ||||
Sbjct 1006073 CTTGTCCTGGATCTTGGCCTTGACATTGTCAATC---GTGTCCGACGACTCGACCTCGAG 1006017
Query 34086 CGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| || || || || || || || || ||||||||||||||
Sbjct 1006016 GGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005975
Score = 100 bits (110), Expect = 2e-16
Identities = 100/127 (79%), Gaps = 2/127 (2%)
Strand=Plus/Minus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968
|| |||||||||| || |||||||||||||||||||||||||| || || || || ||
Sbjct 1005964 AGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCG 1005906
Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028
| || |||| |||||||||||||| ||||| ||||| || ||| || | || |||
Sbjct 1005905 GCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTC 1005846
Query 34029 TTTGTCC 34035
||||||
Sbjct 1005845 CTTGTCC 1005839
Score = 96.9 bits (106), Expect = 3e-15
Identities = 157/222 (71%), Gaps = 8/222 (4%)
Strand=Plus/Minus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968
|| |||||||||| || ||||||||||||||||||||||| || || || || || ||
Sbjct 1006420 AGACGCAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTC-GCTAAGCGTGCG 1006362
Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028
| || |||| |||||||||||||| ||||| ||||| || ||| || | || |||
Sbjct 1006361 GCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTC 1006302
Query 34029 TTTGTCCATAATTTTTTGCTT---AATGGAACTCACACTATCAGTAGATTCGCATTCGAC 34085
|||||| || || ||| | || | || | || | || ||| ||||
Sbjct 1006301 CTTGTCCTGGATCTTGGCCTTGACATTGTCAATC---GTGTCCGACGACTCGACCTCGAG 1006245
Query 34086 CGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| || || || || || || || || ||||||||||||||
Sbjct 1006244 GGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006203
>seq5
Length=687159
Score = 96.9 bits (106), Expect = 3e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || | ||| ||||| || || || ||||||||||||||||| || ||||| ||
Sbjct 141819 ACCACCGCGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACT 141760
Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
|| || | || |||| ||||||||| ||||| |||||||||||||| ||| |||
Sbjct 141759 CAGGGTACGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGG 141700
Query 34020 CACGCTCTCTTTGTCC 34035
| || ||| ||||||
Sbjct 141699 AATGCCCTCCTTGTCC 141684
Score = 91.5 bits (100), Expect = 1e-13
Identities = 104/137 (76%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || | ||| |||||||| || || ||||||||||||||||| |||||||| || ||
Sbjct 231726 ACCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTC-GC 231784
Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018
| || || | || |||| ||||||||||| || ||||||||||| || ||| |
Sbjct 231785 TCAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAG 231844
Query 34019 GCACGCTCTCTTTGTCC 34035
| | | ||| ||||||
Sbjct 231845 GGATACCCTCCTTGTCC 231861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397062361286416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |