Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01- 09] 8 sequences; 7,729,037 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq8 147 2e-30 seq4 136 4e-27 seq1 125 7e-24 seq5 113 4e-20 >seq8 Length=440650 Score = 147 bits (162), Expect = 2e-30 Identities = 298/441 (68%), Gaps = 21/441 (5%) Strand=Plus/Minus Query 47148 GCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATG 47207 || || ||| |||||||||| |||| ||||||||| ||||| | || || | | Sbjct 42108 GCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTC 42049 Query 47208 AAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAA 47267 || | || | ||||| || || |||| |||||||| |||||| | || || Sbjct 42048 AAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAG 41989 Query 47268 GGCCTGCACACCAACTTTGCCTGTCTCTACTACAAC-ACTAGAGTCGATCAAAAGTTGGA 47326 |||||||||||| |||||||||||||| | || | || || | ||| Sbjct 41988 GGCCTGCACACCGACTTTGCCTGTCTCCTGTTCAGCCACCTGA-------AGAAG----- 41941 Query 47327 CGTGCCCACCGT----CAGCGA----CATGTTTGCCGAAGCCGTCGCCATTGAGATGGAG 47378 ||||| |||| | ||| || ||| | |||| || || ||||||||| ||| Sbjct 41940 CGTGCGCACCCTGACACAGTGAACCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGAC 41881 Query 47379 TTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAG 47438 ||||| | || || |||| | || | | || ||||||||| | ||| | || Sbjct 41880 TTTTTGACTGACGCCTTGCCTGTTTCGCTGATCGGCATGAACGCGCGCCTCATGTGCCAG 41821 Query 47439 TACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCAC 47498 ||||| || ||||| || |||||||||||||| | || | || ||| ||| || Sbjct 41820 TACATTGAGTTTGTGGCGGACCGCCTGCTCGTCAACCTCGGCAACCCGAAGCACTACAAC 41761 Query 47499 ACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTC 47558 | ||| || ||||| |||||| | ||||| |||||| |||||||| | ||||||||| Sbjct 41760 TCGACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTTTC 41701 Query 47559 GAGAAGCGCGTCGGCGAATAT 47579 ||| ||||| | ||| ||| Sbjct 41700 GAGCGCCGCGTTGCCGACTAT 41680 Score = 111 bits (122), Expect = 1e-19 Identities = 942/1491 (63%), Gaps = 96/1491 (6%) Strand=Plus/Minus Query 146060 ACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGA 146119 || ||||||||||||| ||||| ||||| || || || | || || | |||||| ||| Sbjct 55449 ACGGGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGT 55390 Query 146120 ACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACG 146179 ||||||| || |||||||| || || ||||| ||| | || || |||||| || Sbjct 55389 ACGGCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCG 55330 Query 146180 CCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTG-AATCTTTTCCCGTAGTTTGGACCAA 146238 ||| ||||| ||||| | || ||||| || | ||||||| || || || ||| Sbjct 55329 CCATCAGCAGCGAGTTGCGCAGACCGTG-CTGGGCAATCTTTGCCTTGAGCGAGGCCCAG 55271 Query 146239 TTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCC--GCGGA 146296 | ||||| | |||| || | || | ||||||| |||| ||| ||| Sbjct 55270 TCCCACA---GGTCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAG 55214 Query 146297 ACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTG--GCCAGTTCGCAGCT 146354 ||||| || |||||||| || || | || | || | ||||| |||||||| Sbjct 55213 GCAGGG--CTGCCCTCGTACGTCTCGTATGTGCCAT--ATTCGGCCGCCAGCTCGCAGCT 55158 Query 146355 AGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATC-----ATGTAGTTGACGCTCCTG 146409 |||| |||| | ||| |||||||| |||| || || | ||| Sbjct 55157 GCGCTCCAAGGCCGCATGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGC----- 55103 Query 146410 GCCTCCTCGCTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTAT 146468 ||||||| ||||||| | || ||| | | | || || || ||||| || ||||| | Sbjct 55102 GCCTCCTGGCTGTCGAACGG-ATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGAC 55044 Query 146469 CCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCGC---AGTGGGATA 146525 |||| ||| | ||||||||| | |||| | || | || | | | ||| || Sbjct 55043 ACCGATACCGATGGGGCGGTGCCGCATGTTCGAG--CGACGTGCACTCTCCACAGGG-TA 54987 Query 146526 GTGGTTGCTGTCGATGATCTTGTTGAGATTAC-GCACGACAATTTTCGTCAAACGATTCA 146584 || |||| | |||||||| ||| || || |||| || | ||||| || || | Sbjct 54986 GTAGTTGATATCGATGATGCGGTTCAGGTTCTTGCAC-ACCACTTTCGACA--CG-TCGT 54931 Query 146585 GCAGGACAT---AGTCAAATGTTTTAGTTTTAACGTTGACG-CACTT---GTTGACGGCG 146637 ||||| | ||| |||| || | | || || | || | || | | ||| Sbjct 54930 GCAGGCGTTGGAAGTTGTATGTCTTCGAGGCACCGGTGCCCTCAATAAACGTCGGCAGCG 54871 Query 146638 --ATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGG 146695 || || |||| ||| || || || ||||||||| || |||| | |||||| | Sbjct 54870 CAATCGACGCCAGGTTGCACACAGCTGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCG 54811 Query 146696 CGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTG---TTGC 146752 ||| ||||| || |||||| |||||| || || |||||||| |||| || Sbjct 54810 TGCACAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTACT---CTTGCGGTTCG 54754 Query 146753 AGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATC 146812 | ||||||||| || | | || || || || | | | ||||| ||| | | Sbjct 54753 CCGAGTCCTTGTACAGGACAAAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGAT--AGC 54696 Query 146813 TAAACAAATCT-CTG-GCCTTTACTTGTCTTTCGTACAGTTTATTCTTTTCGTATTTCTC 146870 | || | || ||| ||||| || | | | | | ||||| ||||| Sbjct 54695 GTACCACAGCTTCTGCGCCTTGACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTTCTC 54636 Query 146871 GTACAATATTTCAAAA--CTAGAACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGA 146928 ||||| ||||| || | || || ||| || || || ||| ||| Sbjct 54635 GTACAGAGCATCAAACTCCTCG--CCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGG 54578 Query 146929 CAGAACAGCGACCATTCTTTATTCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAA 146988 || | ||||||||| || |||| | || || ||| |||| |||||||||||| Sbjct 54577 CACATCAGCGACCAGTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATCCAC 54518 Query 146989 AGGCCCAGCATCAAGTCGCGAGCCTTGGCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTG 147048 || |||| | || |||||| || | ||||| ||| ||| | | | || | Sbjct 54517 AGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCC-ATGGTTCTTGCGCAGATC 54459 Query 147049 AGGACAT-CGTAAATTTCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCG 147107 | | || | ||| |||| ||||| ||||||| ||| || | ||||| || Sbjct 54458 AATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCG 54399 Query 147108 CTTA---CCGCCCTGATCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACAC 147164 ||| |||||||| || |||| |||| || |||| ||| | || || | ||||| ||| Sbjct 54398 CTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCAC 54339 Query 147165 GAGGCCG---------CCGGATTTTGTGGTGCCGTTGTATTGAGCGCTGACGC------- 147208 | ||| ||| || ||| | || |||| |||| | | ||| Sbjct 54338 AATACCGTTGCTCACACCG---TTCGTGCCGGCGATGTAC-GAGCCC-GTCGCACGAATG 54284 Query 147209 -TTTGCACGCTCAGCCCGAGACCTCCGCCCAGATTCGAAATCAAAGC---GGACTCGTGC 147264 | || | | |||| || | ||| ||| || || |||| || || || | || Sbjct 54283 TTGTGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTGAGC 54224 Query 147265 AAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACAC 147324 || | ||| || || ||||| ||| ||||| || | ||||| ||||| || Sbjct 54223 ---GTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGAC 54167 Query 147325 ATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACG--TGC 147382 |||||||| |||||| || ||||| || || ||||| || || | | | Sbjct 54166 ATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTC 54107 Query 147383 CCAGACTCATCAATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCA 147442 | ||| | | ||| ||||| || || |||||| ||||| |||||||| ||| | | Sbjct 54106 TCGGACATGT-AGTTG-TACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGA 54049 Query 147443 GGGCGACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCACGTCATTGA 147493 ||||||||||||||||||||||||||| || ||||||| | | |||||| Sbjct 54048 CGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCTTGCCATTGA 53998 >seq4 Length=1203632 Score = 136 bits (150), Expect = 4e-27 Identities = 147/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||| ||||| |||| || ||||||| || || ||||| || |||||| | Sbjct 406832 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 406773 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||||| ||||| || || ||||| ||||||||||||||| ||| || ||||| | Sbjct 406772 GATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 406713 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||||| |||||| || | ||| | ||| ||||| |||||||| || || Sbjct 406712 GTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGAC 406653 Query 127102 AAAAATCTGCATGGC 127116 || || |||||||| Sbjct 406652 GAAGATTTGCATGGC 406638 >seq1 Length=1509448 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| |||||| || | ||| ||| || ||||| ||||| |||| Sbjct 1005973 CCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1005914 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || || || | |||| ||||| || || ||||| Sbjct 1005913 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGA 1005854 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||||| | || | ||||||| |||||| Sbjct 1005853 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACC 1005794 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | ||| ||||| || || || || |||||||| ||||| Sbjct 1005793 TCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCAT 1005747 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| |||||| || | ||| ||| || ||||| ||||| |||| Sbjct 1006201 CCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1006142 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || || || | |||| ||||| || || ||||| Sbjct 1006141 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGA 1006082 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||||| | || | ||||||| |||||| Sbjct 1006081 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACC 1006022 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | ||| ||||| || || || || ||||| || ||||| Sbjct 1006021 TCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005975 Score = 122 bits (134), Expect = 8e-23 Identities = 170/237 (72%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 126877 CTATACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATT 126936 || ||||| ||||| || | |||| |||||| |||| ||| ||| || ||||| || Sbjct 1006438 CTTTACTGG-CCACCACGGAGACGCAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTT 1006380 Query 126937 GTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTG 126996 || |||| | |||||| ||| || ||||| || || || | |||| ||||| || Sbjct 1006379 ATAGTCGCTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTG 1006320 Query 126997 ATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGT 127056 || ||||| ||||||||||||||| ||| || ||||| | || | ||||||| Sbjct 1006319 GTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGA 1006260 Query 127057 ACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||| |||| ||| | ||| ||||| || || || || ||||| || ||||| Sbjct 1006259 CGACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006203 >seq5 Length=687159 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | |||| ||| | || | ||| ||| || || || ||||| ||| Sbjct 231724 GCACCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCG 231783 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || ||||||| ||| || ||||| || || ||| |||||| ||||| || || ||| Sbjct 231784 CTCAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGA 231843 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| || ||| | | |||| ||||| | | ||| Sbjct 231844 GGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCC 231903 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || |||| ||| | ||| || ||||| || || || || || | ||||||| Sbjct 231904 ACCTCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGG 231955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500752449920