Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01-
09] 8 sequences; 7,729,037 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq8 410 1e-109
seq1 150 2e-31
seq5 122 9e-23
seq4 107 2e-18
>seq8
Length=440650
Score = 410 bits (454), Expect = 1e-109
Identities = 593/827 (72%), Gaps = 25/827 (3%)
Strand=Plus/Plus
Query 132627 CTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGC 132686
||| ||||| || | || |||| | || ||| | |||||| || |||||||| |
Sbjct 41698 CTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTTCGT 41757
Query 132687 TGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743
| |||||||||||| | |||||| ||| ||||||||| | ||| ||||| |||||
Sbjct 41758 CGAGTTGTAGTGCTTCGGGTTGCCGA---GGTTGACGAGCAGGCGGTCCGCCACAAACTC 41814
Query 132744 GATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGG 132802
||||| || ||||| | ||| | | | || | ||| || |||| || || |
Sbjct 41815 AATGTACTGGCACATGAGGCGCGCGTTCATG-CCGATCAGCGAAACAGGCAAGGCGTCAG 41873
Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT----TTCCCTAACGCGCGCC 132858
| | |||| ||||| ||||| || || ||||||| ||| ||| || | |
Sbjct 41874 TCAAAAAGTCCTGCTCAATGGCCACAGCCTCGGTGATGATGCGGTTCACTGTGTCAGGGT 41933
Query 132859 GCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918
|||| || || || || |||||| | || ||||||||| |||| ||||
Sbjct 41934 GCGCACGCTTCTT----CAGGTGGCTGAACAGGAGACAGGCAAAGTCGGTGTGCAGGCCC 41989
Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978
|| || | || ||||| ||||| ||| | || || |||||||||||||| || |||
Sbjct 41990 TCATCGCGCGAGATGAGCTCGTTCGAGAACGACAGACCAGGCATGAGGCCGCGCTTCTTG 42049
Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038
||||| || |||| ||| || |||||| || |||| |||||||||||| || || |||
Sbjct 42050 AGCCAGAAGATGGAGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGGCC 42109
Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098
|| |||||||| ||||| ||| || | |||||||||||| ||||| ||||||
Sbjct 42110 ACAAGGCGCTCCGAGAACGAGGCGCGCCTGTCCGAGATCCAGCGCAGGGCCCACTCGGCC 42169
Query 133099 TTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCA--ACAAACGGAGTTTCTCTTCCG 133156
|| | |||||| || ||||| ||||| ||||| | | |||| | || ||||
Sbjct 42170 TTCTGCTTGACGACGGGGATCGTCTCGATAGCGTTGAAGAGAAACTCA--CGCTGCTCCG 42227
Query 133157 AGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216
|| | ||| |||||||||||| ||| ||| | |||||||| | |||||||||
Sbjct 42228 GCTCGCGGATGTACGTGTCGATGAGGAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCA 42287
Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGC 133275
||| || |||||||| ||||| || |||||| | ||||||| || | || ||| |||
Sbjct 42288 TGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCCTGCACCTC-GGCGCTGAAGCGC 42346
Query 133276 TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG 133335
|||||||| || ||||||||||| ||||| || || || |||||||| ||||| |
Sbjct 42347 TCGACCAGGTTCTCGTTGACGATACCGTCCGAAGCAGCAAAGAAGGCCAGGACGTGGCTC 42406
Query 133336 ATGAAATGGCGCTCGTTGTCGTTCAAGC---GCTCCCAGTCGCGCGTGTCCTTGGACAGG 133392
| || |||||||| |||||||||| || | ||||||||| || |||||| || |||
Sbjct 42407 ACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCAGTCGTGCAAGTCCTTCGAGAGG 42466
Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|||| ||||||| ||||||| ||||| |||||||| || ||||||||
Sbjct 42467 TCCATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCTTGTACAT 42513
>seq1
Length=1509448
Score = 150 bits (166), Expect = 2e-31
Identities = 168/219 (77%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| || || || || ||||| ||||| || |||||| |||| |||||| | |
Sbjct 1005746 AATGCAAATTTTTGTTAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTC 1005805
Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | || || | | || | || |||| ||||| ||||| ||||| | ||||
Sbjct 1005806 GGACACGATTGACAATG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 1005864
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| || |||| || ||||| |||||||| || | ||||| || | ||||||||
Sbjct 1005865 AACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACA 1005924
Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459
|||| || ||||| ||| |||||||| ||||||||||||
Sbjct 1005925 ACATTCAGAAGGAGAGC-ACGCTGCACTTGGTGCTGCGT 1005962
Score = 149 bits (164), Expect = 6e-31
Identities = 167/218 (77%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || ||||| ||||| || |||||| |||| |||||| | |
Sbjct 1005975 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1006034
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | || || | | || | || |||| ||||| ||||| ||||| | |||||
Sbjct 1006035 GACACGATTGACAATG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 1006093
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| || |||| || ||||| |||||||| || | ||||| || | |||||||||
Sbjct 1006094 ACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACAA 1006153
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459
||| || ||||| ||| |||||||| ||||||||||||
Sbjct 1006154 CATTCAGAAGGAGAGC-ACGCTGCACTTGGTGCTGCGT 1006190
Score = 141 bits (156), Expect = 9e-29
Identities = 173/231 (75%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || ||||| ||||| || |||||| |||| |||||| | |
Sbjct 1006203 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1006262
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | || || | | || | || |||| ||||| ||||| ||||| | |||||
Sbjct 1006263 GACACGATTGACAATG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 1006321
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| || |||| || ||||| |||||||| || | ||||| || | |||||| ||
Sbjct 1006322 ACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTATAA 1006381
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
||| || ||||| ||| ||||| || |||||||||||| | | || ||||
Sbjct 1006382 CATTCAGAAGGAGAGC-ACGCTACACTTGGTGCTGCGTCTCCGTGGTGGCC 1006431
>seq5
Length=687159
Score = 122 bits (134), Expect = 9e-23
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||| | ||||| || || || || || || || |||||| |||| || ||| | ||
Sbjct 231953 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 231894
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || | || |||| ||||| ||||| || || | ||||||
Sbjct 231893 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 231834
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| ||||| |||||||| || | ||||| || | ||||||||||
Sbjct 231833 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 231774
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| ||| ||||| || | ||||||||
Sbjct 231773 ATCCAGAAGGAGAGC-ACGCTCCACCTTGTGCTGCG 231739
>seq4
Length=1203632
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || || ||| | || |||||| | |
Sbjct 406641 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 406700
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || | || |||| ||||| ||||| || || | ||||||
Sbjct 406701 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 406760
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| || || ||||| || |||| ||||| || | ||||||||||
Sbjct 406761 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAAC 406820
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458
|| || ||||| ||| || ||||| | ||||| ||
Sbjct 406821 ATTCAGAAGGAGAGC-ACCCTGCACCTTGTGCTTCG 406855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172749982720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |