Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01- 09] 8 sequences; 7,729,037 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 1e-11 >seq1 Length=1509448 Score = 86.0 bits (94), Expect = 1e-11 Identities = 161/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | || || |||| |||| || ||| || ||| || Sbjct 1005982 ATTTGCATACCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTG 1005923 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||| | ||| | ||| || | || || ||||||||||| | | |||||| Sbjct 1005922 TAGTCGCTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGG 1005863 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || || || || || || || |||| || | ||| ||| || || || Sbjct 1005862 TCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGAC 1005803 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||| || || || || || || || || || || || || ||||| ||||||||| Sbjct 1005802 GACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCATT 1005746 Score = 84.2 bits (92), Expect = 4e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | || || |||| |||| || ||| || ||| || Sbjct 1006210 ATTTGCATACCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTG 1006151 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||| | ||| | ||| || | || || ||||||||||| | | |||||| Sbjct 1006150 TAGTCGCTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGG 1006091 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || || || || || || || |||| || | ||| ||| || || || Sbjct 1006090 TCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGAC 1006031 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || || || || || || || || || || ||||| |||||||| Sbjct 1006030 GACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899654310034560