Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01-
09] 8 sequences; 7,729,037 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1 86.0 1e-11
>seq1
Length=1509448
Score = 86.0 bits (94), Expect = 1e-11
Identities = 161/237 (68%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||| | | || || |||| |||| || ||| || ||| ||
Sbjct 1005982 ATTTGCATACCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTG 1005923
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|||||| | ||| | ||| || | || || ||||||||||| | | ||||||
Sbjct 1005922 TAGTCGCTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGG 1005863
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| ||||| || || || || || || || |||| || | ||| ||| || || ||
Sbjct 1005862 TCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGAC 1005803
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||| || || || || || || || || || || || || ||||| |||||||||
Sbjct 1005802 GACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCATT 1005746
Score = 84.2 bits (92), Expect = 4e-11
Identities = 160/236 (68%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||| | | || || |||| |||| || ||| || ||| ||
Sbjct 1006210 ATTTGCATACCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTG 1006151
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|||||| | ||| | ||| || | || || ||||||||||| | | ||||||
Sbjct 1006150 TAGTCGCTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGG 1006091
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| ||||| || || || || || || || |||| || | ||| ||| || || ||
Sbjct 1006090 TCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGAC 1006031
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || || || || || || || || || || ||||| ||||||||
Sbjct 1006030 GACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899654310034560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |