Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01- 09] 8 sequences; 7,729,037 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3 129 2e-24 seq1 120 9e-22 seq6 96.9 1e-14 >seq3 Length=1353617 Score = 129 bits (142), Expect = 2e-24 Identities = 260/386 (67%), Gaps = 0/386 (0%) Strand=Plus/Minus Query 302491 TCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGTC 302550 ||||| || || || ||||| | | ||| ||| | ||||| | || | ||| || Sbjct 1328095 TCAATACCATCTTCACCGTACGCAAACTCAATTACATTGTTGGTAGAGTTGCGTACAGTT 1328036 Query 302551 ATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCA 302610 |||||| | ||| | | || || | | ||| | ||||||||||| || |||||| Sbjct 1328035 CCATCATAGCAAATAGTTACATCCTCAAGAGCCTTCACCAAACGACGCTGGATGTAACCA 1327976 Query 302611 GTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670 ||| || |||||| ||||| |||||||| ||||| |||||||| |||| ||||||||| Sbjct 1327975 GTTTCAGCTGTTTTCACAGCAGTATCAATCAGACCTTCACGACCAGCCATGGCATGGAAG 1327916 Query 302671 AATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCG 302730 || | || | || | || || | || | | || ||||||| || || || ||| Sbjct 1327915 AAGAATTCATGCGCTGTAAGACCTCGAAGATACGAATTCTCAACAAAGCCTCGACTTTCG 1327856 Query 302731 GGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATA 302790 || | |||| ||||| || |||||||| ||| | | ||| | || ||| Sbjct 1327855 GGGGTGAAGTCGTCTTTGGTGAAATGTGGCAGACTCCGATGGCGGAAACCGAACGGAATA 1327796 Query 302791 CGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCA 302850 ||||| || || || |||||| || | || | | ||| |||||||| || | | | Sbjct 1327795 CGCTTGCCTTCCACCGACTGCTGACCGACACAAGCAGACATTTGCGAAATGTTGATAAAA 1327736 Query 302851 CTGCCCTTGGAGCCAGCATTTACCAT 302876 ||||| || || || ||||||| Sbjct 1327735 GAACCCTTTGAACCCGCGATTACCAT 1327710 >seq1 Length=1509448 Score = 120 bits (132), Expect = 9e-22 Identities = 127/166 (77%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 251487 ACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGC 251546 ||||||||| |||||||| || |||||||| ||||| ||||| |||||||| ||||| Sbjct 736267 ACCGTGTGAGATCATACAGTCGCGCTCCATCTCACCAAAACGCAGACCACCGTCGCGGCT 736208 Query 251547 CCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTG 251606 | ||||||| ||||||| || || ||| | || |||||| | |||||| || Sbjct 736207 GCGACCCTCGACAGGCTGCCGCGTAAGAATCTGCACGGGACCGCGCGCGCGGCTGTGGAT 736148 Query 251607 CTTATCATTTACCATATGCTTGAGACGCTGGTAGAATG-CGGGACC 251651 ||| || | ||||| ||||| |||||||||||| ||| |||| || Sbjct 736147 CTTGTCGTCCACCATGTGCTTCAGACGCTGGTAGTATGTCGGGCCC 736102 Score = 84.2 bits (92), Expect = 6e-11 Identities = 103/138 (75%), Gaps = 6/138 (4%) Strand=Plus/Minus Query 251835 CAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTT 251894 ||| || |||| |||||||||||||| || || || || |||||||| |||||||| | Sbjct 735919 CAGATGCCCGATGGTCATACGACTGGGGATGGCGTGCGGGTTGATGATAATGTCGGGCGT 735860 Query 251895 CAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTCC 251951 | || ||||| ||||| |||| ||| ||||| | || || | ||||| || || Sbjct 735859 AATACCCTCAGCCGTGAACGGCAGATC---TTCCTGGCGGTACGTGATGCCAATGGTACC 735803 Query 251952 CTTTTGTCCGTGACGAGA 251969 ||| |||||||| || || Sbjct 735802 CTTCTGTCCGTGGCGCGA 735785 >seq6 Length=634745 Score = 96.9 bits (106), Expect = 1e-14 Identities = 144/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 289026 TTTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGA-ATTTTGTCTCGCAA 289084 ||| |||| ||||| |||||||| | ||| || | |||||| | ||||| | | || Sbjct 561943 TTTGCCAATCGCATCGATTTCGTCCACGAAGATGATACACGGTGCCATTTTCT-TGGCCG 561885 Query 289085 TTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAG 289144 ||||||| | || | || || |||| |||| ||||||| ||||||| |||||||||| Sbjct 561884 TTGCAAACATATCACGCACGCGAGATGGACCAACACCAACAAACATTTCCACAAATTCAG 561825 Query 289145 AAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 | | ||||| | ||||| ||| |||||| ||||| ||| | || | || | Sbjct 561824 ATCCAGATACGGACAAGAATGGAACACCTGCTTCACCTGCAGTAGCCTTTGCAACTAGCG 561765 Query 289205 TCTTACCTGTTCCAGGTGGTCC 289226 | || ||||| || || ||||| Sbjct 561764 TTTTGCCTGTACCGGGGGGTCC 561743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817449138696