Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01- 09] 8 sequences; 7,729,037 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq8 242 3e-59 seq1 109 5e-19 seq5 87.8 2e-12 >seq8 Length=440650 Score = 242 bits (268), Expect = 3e-59 Identities = 982/1524 (64%), Gaps = 30/1524 (2%) Strand=Plus/Minus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || |||||||| | || || || | |||||||||| | ||| | |||||||| Sbjct 55438 ACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAG 55379 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 | |||||| || || |||||| ||||| || ||||||||| ||||| || || Sbjct 55378 CACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCATCAGCAGC 55319 Query 138628 GAATTCCGTAAACCGTGAAGCTTG--ATTCGTT-CCTTGAGCGACGACCAGTCCCACAAA 138684 || || || | |||||| || | | || || |||||||||| | ||||||||||| Sbjct 55318 GAGTTGCGCAGACCGTG---CTGGGCAATCTTTGCCTTGAGCGAGGCCCAGTCCCACAGG 55262 Query 138685 TCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCT 138744 || || | ||||||||| |||||||| | | ||| || || ||||| Sbjct 55261 TCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAGGCAGGGCTGCCC 55202 Query 138745 TCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCA 138804 ||||||| |||||| ||| | || ||||| |||| ||| ||| | || || Sbjct 55201 TCGTACGTCTCGTATGTGCCATATTCGGCCGCCAGCTCGCAGCTGCGCTCCAAGGCCGCA 55142 Query 138805 TAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGC 138864 | |||||| || || |||||| ||| |||| || ||||| ||| ||| |||| Sbjct 55141 TGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGCGCCTCCTGGCTGTCGAACGGA 55082 Query 138865 ATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGG 138924 || | ||| ||||||| ||||| || || || || || | |||| ||||| || Sbjct 55081 TAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCGATGGGGCGGTGC 55022 Query 138925 CGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTT 138984 |||| || || ||| || | ||| || ||||| | ||||||||| ||| Sbjct 55021 CGCATGTTCGAGCGACGTGCACTCTCCACAGGGTAGTAGTTGATATCGATGATGCGGTTC 54962 Query 138985 AAATT-TCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCC 139043 | || | |||| ||||| || | | | | | |||| || | |||||| | | Sbjct 54961 AGGTTCTTGCAC-ACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTGTATGT--CTTC 54905 Query 139044 GTTGTCGTCGACGACGTCGACAAATTTGTTGACA--CAAATCGAGGCTATGTTGCACACC 139101 | | | || | | || | ||| || | || |||||| || | ||||||||| Sbjct 54904 G-AGGCACCGGTGCCCTCAATAAA--CGTCGGCAGCGCAATCGACGCCAGGTTGCACACA 54848 Query 139102 GCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATC 139161 || ||||| || |||||| |||| ||| || | |||| || | ||||||| Sbjct 54847 GCTGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCGTGCACAGGTTCGAGCTCTTGATC 54788 Query 139162 GTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGT 139221 || || | || | || || || || ||||| | || ||||| || | | | || Sbjct 54787 GTGCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTGTACAGGACAAAAGGA 54728 Query 139222 GTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGA 139281 |||| || || | ||| | ||| | || | ||| | | || | | Sbjct 54727 TTGCCCGTCTCAATTTGCGCCTCGAGGATAGCGTACCACAGCTTCTGCGCCTTGACAGAG 54668 Query 139282 CGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAG 139341 ||| | | | |||||||||||||| ||||| || | || || || || ||| Sbjct 54667 CGCTTGGCGCGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCATAG 54608 Query 139342 GCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTG 139401 ||||| ||| | | |||| | | || ||||| |||||||| |||||||| | | Sbjct 54607 CAGTCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTCTGTTCG 54548 Query 139402 ACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTA 139461 || || | |||||||||||| |||||||||| || | | || |||||||| | Sbjct 54547 ACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCGCGCGCACT 54488 Query 139462 TCTTCCGAACCCATGTTACGT-TTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGG 139520 || ||| ||||| | | | || | || || ||||||||||| | |||||| || Sbjct 54487 TCCTCC-TTGCCATGGTTCTTGCGCAGATCAATAAATTCAAAAACGTCCGAGTGCCACGG 54429 Query 139521 TTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTAC 139577 ||||| ||||| || | ||||| || ||||| || || || |||| || | Sbjct 54428 CTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGC 54369 Query 139578 AGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCT-GTTCCGTTGGTGCTAC 139636 | || ||| | ||||| | ||| ||| | | |||| | ||| ||||| |||| Sbjct 54368 CGTGTTGTTGTACACGCGGAGCATGGGCACAATACCG-TTGCTCACACCGTTCGTGCCGG 54310 Query 139637 GGATGGGACTGTTGCG-AGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAAT 139695 ||| | || || || || | || || | || | || || |||||| | Sbjct 54309 CGAT-GTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAGACCAATACCGCCGGCCGTC 54251 Query 139696 TTGGATATTAAAACGCA-ATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTG 139754 ||| || | | || || | | || ||||||||||| || |||||||| Sbjct 54250 TTGCTGATCATCGCACAGGTCTTG-AGCGTGTCGTATATACCCTCGATCGAGTCGTCCTT 54192 Query 139755 CATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTT--TCGTGCCGGCTGCAAACAGA 139812 ||| | || || ||||| ||||| | ||| || ||| ||||||||| ||||| Sbjct 54191 CATACTCACAAGGAAGCACGACGACATTTGGGG--GTTGGGCGTGCCGGCATTGAACAGG 54134 Query 139813 GTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTC 139872 || || |||||| || || | | ||||| | | |||||| ||||| |||||| Sbjct 54133 GTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATGTAGTTGTACGTCTCGATCGCGCTC 54074 Query 139873 ACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCG 139932 | | ||| |||||||| ||||| | ||| ||||| ||||| || ||| || || Sbjct 54073 GCCACGTCCTCGCCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCC 54014 Query 139933 GCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTAC 139992 || ||| ||| | ||| ||| || | ||| || |||||| |||||||| | Sbjct 54013 GCAACCTTGCCATTGATCCGCAGCAGGTAGGAGCGCTCGAGCGTCTTGAAGCCAAAGAAG 53954 Query 139993 CTATAGTTGAAATCGAGCGCATAA 140016 | |||| ||| ||| || | ||| Sbjct 53953 TTGTAGTGGAAGTCGCGCTCGTAA 53930 >seq1 Length=1509448 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || || || || || || || ||||| || || | | Sbjct 1006203 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1006262 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| || ||| Sbjct 1006263 GACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1006322 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| |||||||| || |||||||||||| | | | || |||||| Sbjct 1006323 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTATAAC 1006382 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||| || |||||||||||| |||| | || || ||| Sbjct 1006383 ATTCAGAAGGAGAGCACGCTACACTTGGTGCTGCGTCTCCGTGGTGGC 1006430 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||| || ||| |||| || || || || || || || || ||||| || || | Sbjct 1005744 ACAATGCAAATTTTTGTTAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCG 1005803 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || || |||||||| ||||| || || || ||||| || Sbjct 1005804 TCGGACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGAC 1005863 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 ||||| ||| |||| |||||||| || |||||||||||| | | | || || Sbjct 1005864 CAACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTAC 1005923 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||| ||||| || || ||||||||| |||| Sbjct 1005924 AACATTCAGAAGGAGAGCACGCTGCACTTGGTGCTGCG 1005961 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || || || || || || || ||||| || || | | Sbjct 1005975 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1006034 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| || ||| Sbjct 1006035 GACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1006094 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| |||||||| || |||||||||||| | | | || || ||| Sbjct 1006095 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACAAC 1006154 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||||| ||||| || || ||||||||| |||| Sbjct 1006155 ATTCAGAAGGAGAGCACGCTGCACTTGGTGCTGCG 1006189 >seq5 Length=687159 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759 ||| ||||| | || | || || || ||||| || || || || ||||| || || | Sbjct 231957 TACCATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTC 231898 Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819 ||||||| | || | || || |||||||| ||||| || || || ||||| || Sbjct 231897 TTCCGACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGA 231838 Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879 ||||| || ||||||| ||||| || |||||||||||| | | || || || Sbjct 231837 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTA 231778 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| || || ||| | ||| |||| |||| || || Sbjct 231777 CAACATCCAGAAGGAGAGCACGCTCCACCTTGTGCTGCGCCTGCGTGGTGG 231727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897555010240