Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01-
09] 8 sequences; 7,729,037 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq8 114 4e-20
>seq8
Length=440650
Score = 114 bits (126), Expect = 4e-20
Identities = 237/350 (68%), Gaps = 12/350 (3%)
Strand=Plus/Plus
Query 254954 ACGAACGGACGGAGCGGCGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGC 255013
|||||||| |||| ||| ||| | || ||| |||| |||| ||||||| ||| |||
Sbjct 54315 ACGAACGGTGTGAGCAACGGTATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGCGC 54374
Query 255014 TACGTCGATCAAGGGGGCGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGG 255073
||||| || || || ||| ||| ||||| || || || | ||||||||||||||||||
Sbjct 54375 TACGTGGACCAGGGCGGCAACAAGCGCCCGGGCGCCTTTGCGATCTACCTGGAGCCGTGG 54434
Query 255074 CACGCCGAC---ATTGAACGGTTTTTACTGCTGTCCGACAAGACC---GGCACCGAGGAG 255127
||| | ||| ||||| |||| || | | || ||||| | |||| |||||
Sbjct 54435 CACTCGGACGTTTTTGAA-----TTTATTGATCTGCG-CAAGAACCATGGCAAGGAGGAA 54488
Query 255128 CTGATCGCCCGCGACATCTACACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTG 255187
|| ||| |||||| | | | || | ||| ||||||||| ||||| || ||
Sbjct 54489 GTGCGCGCGCGCGACCTGTTCCTGGCGCTGTGGATTCCCGATCTGTTCATGCGCCGTGTC 54548
Query 255188 GAACGAGACGAGACCTGGAGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCT 255247
|||| ||| |||| || ||||| ||| | | || ||||| | ||||
Sbjct 54549 GAACAGAACGGCGACTGGTCGCTGATGTGCCCCGCCGAGTGCCCAGGTCTGGCTGACTGC 54608
Query 255248 TGGGGTGACGAGTTTGAAAAACTGTATCTGGAGTACGAGCGTGCCGGCCG 255297
| || || |||||||| ||||| | |||||||||| | |||||
Sbjct 54609 TATGGCGAGGAGTTTGATGCTCTGTACGAGAAGTACGAGCGCGAGGGCCG 54658
Score = 93.3 bits (102), Expect = 1e-13
Identities = 394/607 (65%), Gaps = 19/607 (3%)
Strand=Plus/Minus
Query 443270 GCGGTTCGTCTTGTTCCCCGTTCAGCATCC-CGACATCTACGACATGTACAA-ACGACAA 443327
||| || ||| | ||||| | || || || ||| |||| | |||||||| | | |
Sbjct 42556 GCGCTTTGTCCTCTTCCC-GATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCC- 42499
Query 443328 GTGGCCCAGTTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAAC 443387
| |||| ||| |||||| |||||||| || ||||| ||||||||| ||| ||| ||
Sbjct 42498 GAGGCCTCGTTCTGGACCGCCGAGGAGATGGACCTCTCGAAGGACTTGCACGACTGGGAC 42439
Query 443388 GAACGACT-ATCTAGCCATGAACGCGATTTCTTCAAATGCATCTTGGCCTTCTTTGCACC 443446
| || | | | | | |||| ||| | || | | | || ||||||||||||| |
Sbjct 42438 CACCGCATGAACGA-CAATGAGCGCCACTTTGTGAGCCACGTCCTGGCCTTCTTTGCTGC 42380
Query 443447 GAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACAC 443506
|||||||||||| ||||| ||||| ||| ||| || ||| | | |
Sbjct 42379 TTCGGACGGTATCGTCAACGAGAACCTGGTCGAGCGCTTCAGCGCCGAGGTGCAGGCCGC 42320
Query 443507 CGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTA 443566
||||||||||| |||||||| ||||| | ||||||||||| ||| | ||| ||
Sbjct 42319 CGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTA 42260
Query 443567 CAGTCAGTTGATCAAGACAC-TAATTCCGAACGAAGACGAACAGCG---GTCCATCTTCT 443622
| | | ||| ||||| || |||| ||| || ||||| || |||||
Sbjct 42259 CTCGCTCCTCATC--GACACGTACATCCG--CGAGCCGGAGCAGCGTGAGTTTCTCTTCA 42204
Query 443623 CATCGTTCATGACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGG--CT 443680
| || ||| | || | | ||| | ||| | ||||| | ||| ||
Sbjct 42203 ACGCTATCGAGACGATCCCCGTCGTCAAGCAGAAGGCCGAGTGGGCCCTGCGCTGGATCT 42144
Query 443681 CGAACGAGAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACT 443740
|| || | ||| ||| ||||| || || || ||||| | ||||| || |
Sbjct 42143 CGGACAGGCGCGCCTC--GTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGCAT 42086
Query 443741 GTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACG 443800
|| ||| ||| | || ||||||||||||||| | || ||||| || || |||| |
Sbjct 42085 CTT-TTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTG 42027
Query 443801 GTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCT 443860
||||| | || ||||| || ||| || || ||||| |||| |||||| ||||
Sbjct 42026 GTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAGGGCCTGCACACCGACTTTGCCT 41967
Query 443861 GTCTTCT 443867
|||| ||
Sbjct 41966 GTCTCCT 41960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588335837195560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |