Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01- 09] 8 sequences; 7,729,037 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8 167 3e-36 >seq8 Length=440650 Score = 167 bits (184), Expect = 3e-36 Identities = 604/932 (65%), Gaps = 25/932 (3%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || || || || || |||| ||||| ||||| ||||| ||| ||||||| | | Sbjct 54877 GGCAGCGCAATCGACGCCAGGTTGCACACAGCTGTCTCGTCCGGCGAGCTGTACTCGATA 54818 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | ||| || ||||| ||||| |||| ||||| ||||||||||| | Sbjct 54817 ATCTCCGTGCACAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTACTCTTGCGG 54758 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 || || |||||||| || | | || | |||||||| | || | | ||| ||| Sbjct 54757 TTCGCCGAGTCCTTGTACAGGACAAAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGATA 54698 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468 || | ||| | | || ||| || | ||| | ||||| || ||||| ||||||||| Sbjct 54697 GCGTACCACAGCTTCTGCGCCTTG-ACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTT 54639 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTG 111527 ||| || || ||||||||||| ||| || ||| | |||||||| || | | | Sbjct 54638 CTCGTACAGAGCATCAAACTCCTC-GCCATAGCAGTCAGCCAGACCTGGGCACTCGGCGG 54580 Query 111528 GACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC 111587 | || | || ||||| | || | || || || |||||| || || ||||||| Sbjct 54579 GGCACATCAGCGACCAGTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATCC 54520 Query 111588 ACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACT 111647 |||| | || || || | || | || || | || ||||| || | | Sbjct 54519 ACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCCATGGTTCTTGCGCAGAT 54460 Query 111648 CAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC---- 111703 ||| || || | | |||| |||||| ||||| || |||| || | | ||| Sbjct 54459 CAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGC 54400 Query 111704 ---TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760 | | | ||||| || | || |||||||| ||| ||| | ||||| ||||| Sbjct 54399 GCTTGTTGCCGCCC----TGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATG 54344 Query 111761 GGAATAATACCATCTGAT-TGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTC 111817 || | |||||| | || | ||| || || || ||| |||||| | || | Sbjct 54343 GGCACAATACCGT-TGCTCACACCGTTCGTGCCGGCGATGTACGAG--CCCGTCGCACGA 54287 Query 111818 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 111877 | | ||||||| || |||||||| || ||| ||| ||| |||||| | | Sbjct 54286 ATGTTGTGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTG 54227 Query 111878 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 111937 || || | || ||||| | ||| ||||| ||||| | | ||||||||| ||| Sbjct 54226 AGCGTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGAC 54167 Query 111938 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 111997 || || || | || || || |||||||| ||||| || | ||||| || | | ||| Sbjct 54166 ATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTG--TGTAAAGGCCT 54109 Query 111998 --TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGA 112055 | |||||| | || ||| ||||| | | | | ||| || ||||||||||||| Sbjct 54108 TCTCGGACATGTAGTTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGA 54049 Query 112056 TTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAA 112115 ||||| ||||||| ||||| ||| ||| ||| | |||||| || ||| | | Sbjct 54048 CGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCTTGCCATTGATCCGCAGCA 53989 Query 112116 GATAGCTCTTCTCAAGGGTTTTGAGACCAAAG 112147 | ||| ||| || || |||| |||||| Sbjct 53988 GGTAGGAGCGCTCGAGCGTCTTGAAGCCAAAG 53957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031937196800