Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149175.1_202017-01- 09] 8 sequences; 7,729,037 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq4 107 2e-18 seq1 84.2 2e-11 >seq4 Length=1203632 Score = 107 bits (118), Expect = 2e-18 Identities = 254/379 (67%), Gaps = 6/379 (2%) Strand=Plus/Minus Query 30083 TGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATG 30142 || || || ||||| |||||| | ||| || |||||||||| |||| || | ||| Sbjct 577757 TGACAAGGTGGAAGCGCCATGTTGTCCAGATCGATGGGGTTCCATGCGCTCAGTAAAATG 577698 Query 30143 CGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCC 30202 |||| ||| |||||| || |||| | || | | ||| || ||||| || ||| Sbjct 577697 CGCCGGTCCGTTGGGTTCGTCTTGATTTGTTCGATGACGTGGGCGAGTTGATCGACACCC 577638 Query 30203 ATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAA 30261 ||| ||||| || ||| ||| |||| || || || || | ||| ||||| Sbjct 577637 TGACCCTGGTAGT-TGGTATCAGCATCCACATACTTCGCGCCAAAGTGGCGCCATTGGAA 577579 Query 30262 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAA 30321 |||||||| || |||||||| || || | |||| | | || | ||| | || ||| Sbjct 577578 GCCGTACACTGGACCCAGGTCACCTTCACGGCGGTGCCCAAGTCCGCGCTTCTGCAGAAA 577519 Query 30322 GTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTC--TCAGAGAGCTCTTTGGAG 30379 || ||||||| ||| | |||||||| | ||| ||| ||| |||| || ||| Sbjct 577518 TTCGGTGGAACCATTGCCATCCCAGATGTGTACAT--TTCGTTCACTGAGCCACTTAGAG 577461 Query 30380 TTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTC 30439 | ||| ||| | ||||||||||||||| |||| ||| | ||||||| | | Sbjct 577460 TCCGTGCGCCCGGCAATGAACCACAGCAGCTCTTCCAGCACGCCACGGTAAAAGACACGC 577401 Query 30440 TTGGTCGTGAGGAGGGGAA 30458 || || || | ||||||| Sbjct 577400 TTCGTTGTCAAAAGGGGAA 577382 >seq1 Length=1509448 Score = 84.2 bits (92), Expect = 2e-11 Identities = 167/242 (69%), Gaps = 18/242 (7%) Strand=Plus/Minus Query 52677 GAGGGCTACCTGGACAGGGTGACTGTG---GACGTGGACTCTGACGGCAAGAAGCTCGTC 52733 ||||||||| ||||| |||| | | ||| |||||| ||| ||| ||||||| Sbjct 879754 GAGGGCTACGTGGACCAGGTGCTTATCAGCGACACGGACTCGGACC---AGACGCTCGTC 879698 Query 52734 AAGGTGAGGCTGAGGGCCCCCAGGCAC-----CCAGAGATGGGCGACAAGTTTGCGTCG- 52787 |||| | || | || |||| | | |||||| ||||||||||||| ||||| Sbjct 879697 AAGGCG---CTCAT--CCGCCAGACGCGGCGGCCAGAGCTGGGCGACAAGTTCTCGTCGC 879643 Query 52788 TTCACGGCGCAAAAGGGGACGTGCGGAGCCGTCCTGACCCAGGAGGACATGCCCTTCGAC 52847 |||||| |||||||| ||| || | || | ||||||||| |||| ||| | Sbjct 879642 GCCACGGC-CAAAAGGGCGTGTGTGGTCTGATTGTGCCGCAGGAGGACCTGCCGTTCACC 879584 Query 52848 AAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGACC 52907 | ||||| | |||||| ||||||| |||||||||| ||| || || | ||||| Sbjct 879583 GACGACGGTATCCACCCCGACATCATCATGAACCCCCACGGCTTCCCGTCGCGTATGACG 879524 Query 52908 GT 52909 || Sbjct 879523 GT 879522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310360384736