Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq45 167 2e-36 >seq45 Length=461343 Score = 167 bits (184), Expect = 2e-36 Identities = 555/854 (65%), Gaps = 21/854 (2%) Strand=Plus/Plus Query 15935 TCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCCATAAAATCAAAGGGATTAGTA 15994 ||||| ||||| | ||| || | | || || || |||||||| |||||||| || ||| Sbjct 410385 TCGAAAAAGTTCGATTTGCCTTGGAGCGAAATGTTCTCCATAAAGTCAAAGGGGTTCGTA 410444 Query 15995 GCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAATCTATCTGCTACAAATTCTATA 16054 || | | ||| | || |||| || | || | ||| || |||||||| || Sbjct 410445 GCATTATAGTGCTTCGGGTTACCCAACGCCACCAGCAAACGATCCGCAACAAATTCAATG 410504 Query 16055 TATTGACACATTAAGTC--GCAATTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTA 16112 || |||||||| | ||| ||| || || || || | || || | || | | | Sbjct 410505 TACTGACACATGA-GTCTTGCA-TTCATGCCGATCAACGACACTGGCAAGGCATCCGACA 410562 Query 16113 AAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGGTGGCTCGTGTTTCAGACG 16172 |||| | ||| || || |||| || || |||| || ||||| | ||||| | | Sbjct 410563 AAAAGTTTTGCTCGATGCCAACAGCCTCCGTAATAAT-TCGGTTGACCGTGTCTGGGT-- 410619 Query 16173 GTGTATGGTTT---AGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGT 16229 ||| | | || | ||| |||||| | || || |||||| || | ||||| | Sbjct 410620 GTGCACGTTTCTTCAAGTGGCTAAACAGCAAGCAGGCAAAGTCGGTGTGCAAACCTTCAT 410679 Query 16230 CTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACC 16289 ||| ||| ||||| || || || | | || ||||| ||| || || || | || Sbjct 410680 CTCGCGAGATCAGTTCATTAGAGAAGGAAAGTCCCGGCATCAATCCACGCTTTTTCAGCC 410739 Query 16290 AGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTA 16349 |||| |||| ||||| || ||||| || || || || || |||| ||||| || | | Sbjct 410740 AGAAAATCGAGGCAAAGGATCCCGAGAAAAAGATCCCTTCCACAGCAGCAAATGCTACGA 410799 Query 16350 ATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTT 16409 ||||| | ||| || || | | ||||| | | |||| || ||||||| Sbjct 410800 GACGTTCAGAAAACGAGGCGCGTTGGTCATTGATCCACCGCAATGCCCACTCTGCTTTTT 410859 Query 16410 GTTTTA-TACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCG 16468 |||| | ||| | |||||||| || || || ||||| |||| || || ||| Sbjct 410860 GTTTCACTAC-AGGGATCGTTTCAATAGCATTGAACAAGAACTCTCGTTGCTCTGGCTCG 410918 Query 16469 ATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATC 16528 ||||| ||||| |||| || ||| |||| ||||| |||||||| || || Sbjct 410919 CGGATATAGGTATCGATCAATAGCGAGTAGGTTTCCGAGTGGATGTTCTCAATCATGATT 410978 Query 16529 TGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCC 16588 || || |||||||| || || || || || ||| ||||| | ||||||||| Sbjct 410979 TGGAAGCCATAGAAACAGCGCGCTTCAGCAGCTTGCACTTCGTTGCTGAATCGTTCCAAG 411038 Query 16589 AGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAA 16648 || ||||| || || || ||||| || || |||||||||| | || | || || Sbjct 411039 AGATTCTCGTTAACAATCCCGTCCGAGGCCGCGAAAAACGCCAGCACATGACTGATAAAG 411098 Query 16649 TAT------TTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCC 16702 | | || |||| || | | | |||||| | | ||| ||||| | || Sbjct 411099 TGTCGCTCATTGTCGTTCAATTT---GTTGTCCCAATCATGCAGATCCTTGGACAAGTCG 411155 Query 16703 ACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTG 16762 | |||||| | ||||| || ||| | ||||| || ||||||| |||||| |||| | Sbjct 411156 ATTTCTTCCGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAAATCTCATGG 411215 Query 16763 TATTGTATGGGAAA 16776 ||| | |||||||| Sbjct 411216 TATCGGATGGGAAA 411229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414086758680