Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq45 167 2e-36
>seq45
Length=461343
Score = 167 bits (184), Expect = 2e-36
Identities = 555/854 (65%), Gaps = 21/854 (2%)
Strand=Plus/Plus
Query 15935 TCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCCATAAAATCAAAGGGATTAGTA 15994
||||| ||||| | ||| || | | || || || |||||||| |||||||| || |||
Sbjct 410385 TCGAAAAAGTTCGATTTGCCTTGGAGCGAAATGTTCTCCATAAAGTCAAAGGGGTTCGTA 410444
Query 15995 GCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAATCTATCTGCTACAAATTCTATA 16054
|| | | ||| | || |||| || | || | ||| || |||||||| ||
Sbjct 410445 GCATTATAGTGCTTCGGGTTACCCAACGCCACCAGCAAACGATCCGCAACAAATTCAATG 410504
Query 16055 TATTGACACATTAAGTC--GCAATTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTA 16112
|| |||||||| | ||| ||| || || || || | || || | || | | |
Sbjct 410505 TACTGACACATGA-GTCTTGCA-TTCATGCCGATCAACGACACTGGCAAGGCATCCGACA 410562
Query 16113 AAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGGTGGCTCGTGTTTCAGACG 16172
|||| | ||| || || |||| || || |||| || ||||| | ||||| | |
Sbjct 410563 AAAAGTTTTGCTCGATGCCAACAGCCTCCGTAATAAT-TCGGTTGACCGTGTCTGGGT-- 410619
Query 16173 GTGTATGGTTT---AGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGT 16229
||| | | || | ||| |||||| | || || |||||| || | ||||| |
Sbjct 410620 GTGCACGTTTCTTCAAGTGGCTAAACAGCAAGCAGGCAAAGTCGGTGTGCAAACCTTCAT 410679
Query 16230 CTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACC 16289
||| ||| ||||| || || || | | || ||||| ||| || || || | ||
Sbjct 410680 CTCGCGAGATCAGTTCATTAGAGAAGGAAAGTCCCGGCATCAATCCACGCTTTTTCAGCC 410739
Query 16290 AGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTA 16349
|||| |||| ||||| || ||||| || || || || || |||| ||||| || | |
Sbjct 410740 AGAAAATCGAGGCAAAGGATCCCGAGAAAAAGATCCCTTCCACAGCAGCAAATGCTACGA 410799
Query 16350 ATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTT 16409
||||| | ||| || || | | ||||| | | |||| || |||||||
Sbjct 410800 GACGTTCAGAAAACGAGGCGCGTTGGTCATTGATCCACCGCAATGCCCACTCTGCTTTTT 410859
Query 16410 GTTTTA-TACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCG 16468
|||| | ||| | |||||||| || || || ||||| |||| || || |||
Sbjct 410860 GTTTCACTAC-AGGGATCGTTTCAATAGCATTGAACAAGAACTCTCGTTGCTCTGGCTCG 410918
Query 16469 ATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATC 16528
||||| ||||| |||| || ||| |||| ||||| |||||||| || ||
Sbjct 410919 CGGATATAGGTATCGATCAATAGCGAGTAGGTTTCCGAGTGGATGTTCTCAATCATGATT 410978
Query 16529 TGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCC 16588
|| || |||||||| || || || || || ||| ||||| | |||||||||
Sbjct 410979 TGGAAGCCATAGAAACAGCGCGCTTCAGCAGCTTGCACTTCGTTGCTGAATCGTTCCAAG 411038
Query 16589 AGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAA 16648
|| ||||| || || || ||||| || || |||||||||| | || | || ||
Sbjct 411039 AGATTCTCGTTAACAATCCCGTCCGAGGCCGCGAAAAACGCCAGCACATGACTGATAAAG 411098
Query 16649 TAT------TTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCC 16702
| | || |||| || | | | |||||| | | ||| ||||| | ||
Sbjct 411099 TGTCGCTCATTGTCGTTCAATTT---GTTGTCCCAATCATGCAGATCCTTGGACAAGTCG 411155
Query 16703 ACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTG 16762
| |||||| | ||||| || ||| | ||||| || ||||||| |||||| |||| |
Sbjct 411156 ATTTCTTCCGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAAATCTCATGG 411215
Query 16763 TATTGTATGGGAAA 16776
||| | ||||||||
Sbjct 411216 TATCGGATGGGAAA 411229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414086758680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |