Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq45 172 7e-38
>seq45
Length=461343
Score = 172 bits (190), Expect = 7e-38
Identities = 401/601 (67%), Gaps = 8/601 (1%)
Strand=Plus/Plus
Query 24124 TAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGG 24183
|||||| ||| || || || ||| ||| | ||| || |||| || | ||| || |
Sbjct 410641 TAAACAGCAAGCAGGCAAAGTCGGTGTGCAAACCTTCATCTCGCGAGATCAGTTCATTAG 410700
Query 24184 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATC 24243
| || | ||||| ||||| | ||||||||||| ||||| || || || ||||| ||||
Sbjct 410701 AGAAGGAAAGTCCCGGCATCAATCCACGCTTTTTCAGCCAGAAAATCGAGGCAAAGGATC 410760
Query 24244 CAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGC 24303
| || || || || ||||| || || ||||| || | || | ||| | | |||||
Sbjct 410761 CCGAGAAAAAGATCCCTTCCACAGCAGCAAATGCTACGAGACGTTCAGAAAACGAGGCGC 410820
Query 24304 ---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 24360
||||| |||||| ||||| || || || | ||| || ||| || || |
Sbjct 410821 GTTGGTCATTGATCCACCGCAATGCCCACTCTGCTTTTTGTTTCACTACAGGGATCGTTT 410880
Query 24361 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 24420
| |||||||| || | | | | || | || | ||| ||||| ||||| |
Sbjct 410881 CAATAGCATTGAACAAGAACTCTCGTTGCTCTGGCTCGCGGATATAGGTATCGATCAATA 410940
Query 24421 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAG 24480
| || ||||||| || ||||| ||||| ||||| || || |||||||| | |
Sbjct 410941 GCGAGTAGGTTTCCGAGTGGATGTTCTCAATCATGATTTGGAAGCCATAGAAACAGCGCG 411000
Query 24481 CCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 24540
| || | | || ||||| | | |||||||| | ||| || || || || ||||
Sbjct 411001 CTTCAGCAGCTTGCACTTCGTTGCTGAATCGTTCCAAGAGATTCTCGTTAACAATCCCGT 411060
Query 24541 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT 24599
| ||| || |||||||||| ||||| | ||||| | | || | || ||| | |
Sbjct 411061 CCGAGGCCGCGAAAAACGCCAGCACATGACTGATAAAGTGTCGCTCAT-TGTCGTTCAAT 411119
Query 24600 TTATT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 24656
|| || |||||||| | ||| || || | || | ||||||| | ||||| || ||
Sbjct 411120 TTGTTGTCCCAATCATGCAGATCCTTGGACAAGTCGATTTCTTCCGCAGTCCAGAAAGAA 411179
Query 24657 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAAT 24716
|| || ||||| || ||||| | ||| || ||||| ||| | || ||||| | ||||||
Sbjct 411180 GCTTCAGCCTTCTTGTACATTTGCCAAATCTCATGGTATCGGATGGGAAACAGTACAAAT 411239
Query 24717 C 24717
|
Sbjct 411240 C 411240
Score = 156 bits (172), Expect = 5e-33
Identities = 418/637 (66%), Gaps = 4/637 (1%)
Strand=Plus/Minus
Query 53990 TCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCA 54049
||| | ||||||||||| | ||| || ||| | | || || || |||||| | ||
Sbjct 424959 TCAGCAGGACACATCAAAGTCCAGTCGCCGCCCTGCTCGACACGACGCATAAACAAGTCT 424900
Query 54050 GGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT 54109
|| ||||| | || ||| | || | | | | ||| || ||||| ||||||
Sbjct 424899 GGCATCCACAATGCATAAAACAAGTCGCGAGCGCGAACTTCTTCTTTTCCGTGGTTCTTT 424840
Query 54110 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACT 54169
|| || |||||| | | | || |||||||| || |||| ||| || | | | |
Sbjct 424839 CGGAGGTCAAGGAACTCGAACACGTCCGAATGCCAAGGCTCCAGGTAGATAGCAAAAGCA 424780
Query 54170 CCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 54229
||||| || ||||| || || ||||| | ||| | || ||||| ||| | || | | |
Sbjct 424779 CCAGGACGCTTGTTGCCACCTTGATCGACGTAGCGTGCAGTGTTGTTAAACACACGGAGC 424720
Query 54230 ATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGA 54289
|| |||| ||| || ||| | |||||||| |||| || || || || | ||
Sbjct 424719 ATAGGAACAATCCCGTTGCTAACGCCATTGGTACCGGCAATGTAAGAGCCCGTGCCGCGG 424660
Query 54290 ATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT 54349
||||| || | ||| || || || || |||| ||||| | || || |||
Sbjct 424659 ATATTGTGGATATGCAAACCGATTCCACCGGCGGTTTTCGAGATCATCGCACAAGATTTG 424600
Query 54350 AACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGAC 54409
| || ||||| ||||| || || ||| ||| |||| | | ||||| ||||
Sbjct 424599 AGTGTGTCATAAATGCCTTCGATGGAATCGTCCTTCATCCCGACCAAGAAACAAGAAGAC 424540
Query 54410 ATTTGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 54467
||||| || || | ||||| ||||| |||| || ||||| || ||||| ||| |
Sbjct 424539 ATTTGTGGATTCGGC--GTTCCAGCATTGAATAGAGTCGGAGATGCATGCGTGAACGCCT 424482
Query 54468 TTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTA 54527
|||| || | | ||||| |||||||| || |||| || || ||||| |
Sbjct 424481 TTTCGGACATCATGTTGTATGTCTCGATGGCGCTTTCTACGTCTTCGCCGTGGATTCCCA 424422
Query 54528 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCA 54587
||||||||||||| | ||| || ||||| | ||| | | ||| ||| || |||||
Sbjct 424421 CTGCGACACGCATCAGCATATGTTGAGGACGTTCGGCAACTTTGCCGTTGATACGCAGCA 424362
Query 54588 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 54624
|||||||| || | || || || |||||| ||||
Sbjct 424361 AGTAGGATCGCTCTAGTGTCTTGAAGCCAAAAAAGTT 424325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721236345520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |