Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq17 100 2e-16 seq27 86.0 5e-12 >seq17 Length=3070003 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| |||||||| | ||||||| ||| | ||| |||||||| || ||||| ||||| Sbjct 1437807 TCCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 1437748 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 || ||| |||| || || ||||| || ||| | ||||| | || |||||| || Sbjct 1437747 GAGTGTTCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGG 1437688 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||| || ||||| |||||| || || | ||| |||||| | || Sbjct 1437687 AATGCCCTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAAC 1437628 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| |||||||||||||| || || || ||||| || | |||||| Sbjct 1437627 TTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCAT 1437580 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| ||| | ||| |||||||| || ||||| ||||| | Sbjct 1437578 CCACCACGGAGTCGGAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCACTC 1437519 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | ||||||| || ||||| || ||| | ||||| | || |||||| || Sbjct 1437518 AAGGTACGTCCGTCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGA 1437459 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| || ||||| |||||| || || | | | |||||| | ||| | Sbjct 1437458 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACT 1437399 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| |||||||||||||| || || || || || || | |||||| Sbjct 1437398 TCCAAAGTAATGGTCTTGCCAGTCAATGTCTTCACGAAAACTTGCAT 1437352 >seq27 Length=1447875 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||||| ||||||||| ||||| || ||||| ||||| | Sbjct 354104 CCACCACGCAGACGGAGCACCAAGTGCAAAGTGCTTTCCTTCTGGATGTTGTAGTCGCTC 354163 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | || |||||||| || || ||| | || | || ||| || ||| || Sbjct 354164 AAAGTACGACCATCTTCCAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGAGGA 354223 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||||| || || | ||| || ||| || ||| Sbjct 354224 ATACCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCGATCGTGTCAGAGGATTCCACC 354283 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | |||||| ||||| || || | || ||||| || | |||||| Sbjct 354284 TCAAGGGTAATCGTCTTACCCGTCAGGGTCTTGACGAACACTTGCAT 354330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258947832084