Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq17 100 2e-16
seq27 86.0 5e-12
>seq17
Length=3070003
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007
||| |||||||| | ||||||| ||| | ||| |||||||| || ||||| |||||
Sbjct 1437807 TCCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 1437748
Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067
|| ||| |||| || || ||||| || ||| | ||||| | || |||||| ||
Sbjct 1437747 GAGTGTTCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGG 1437688
Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127
| ||| || ||||| |||||| || || | ||| |||||| | ||
Sbjct 1437687 AATGCCCTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAAC 1437628
Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| |||||||||||||| || || || ||||| || | ||||||
Sbjct 1437627 TTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCAT 1437580
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| ||| | ||| |||||||| || ||||| ||||| |
Sbjct 1437578 CCACCACGGAGTCGGAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCACTC 1437519
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| | ||||||| || ||||| || ||| | ||||| | || |||||| ||
Sbjct 1437518 AAGGTACGTCCGTCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGA 1437459
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| || ||||| |||||| || || | | | |||||| | ||| |
Sbjct 1437458 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACT 1437399
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| |||||||||||||| || || || || || || | ||||||
Sbjct 1437398 TCCAAAGTAATGGTCTTGCCAGTCAATGTCTTCACGAAAACTTGCAT 1437352
>seq27
Length=1447875
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | |||||||| ||||||||| ||||| || ||||| ||||| |
Sbjct 354104 CCACCACGCAGACGGAGCACCAAGTGCAAAGTGCTTTCCTTCTGGATGTTGTAGTCGCTC 354163
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| || | | || |||||||| || || ||| | || | || ||| || ||| ||
Sbjct 354164 AAAGTACGACCATCTTCCAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGAGGA 354223
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| ||||||| || || | ||| || ||| || |||
Sbjct 354224 ATACCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCGATCGTGTCAGAGGATTCCACC 354283
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | |||||| ||||| || || | || ||||| || | ||||||
Sbjct 354284 TCAAGGGTAATCGTCTTACCCGTCAGGGTCTTGACGAACACTTGCAT 354330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422258947832084
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |