Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq45 212 6e-50 seq17 120 3e-22 seq27 96.9 4e-15 >seq45 Length=461343 Score = 212 bits (234), Expect = 6e-50 Identities = 403/590 (68%), Gaps = 9/590 (2%) Strand=Plus/Minus Query 116615 TTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGG 116674 || ||||| | ||||| || || |||| |||||||| ||||| || || || |||||| Sbjct 411229 TTTCCCATCCGATACCATGAGATTTGGCAAATGTACAAGAAGGCTGAAGCTTCTTTCTGG 411170 Query 116675 ACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGC---TTGAACGAC 116731 || | || || | ||| |||||||||| | || ||||| | ||||||||| Sbjct 411169 ACTGCGGAAGAAATCGACTTGTCCAAGGATCTGCATGATTGGGACAACAAATTGAACGAC 411110 Query 116732 AACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTC 116791 || ||||| || || |||| || |||||||| |||||||| ||| ||||| || || Sbjct 411109 AATGAGCGACACTTTATCAGTCATGTGCTGGCGTTTTTCGCGGCCTCGGACGGGATTGTT 411050 Query 116792 AACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTC 116851 ||||||||||| | || || ||| | || ||||| | || || ||||| || ||| Sbjct 411049 AACGAGAATCTCTTGGAACGATTCAGCAACGAAGTGCAAGCTGCTGAAGCGCGCTGTTTC 410990 Query 116852 TACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGAC 116911 || ||||| || ||| || |||||| | |||||||||| || ||| | ||||| Sbjct 410989 TATGGCTTCCAAATCATGATTGAGAACATCCACTCGGAAACCTACTCGCTATTGATCGAT 410930 Query 116912 ACGTACGTGCGCTCTTCGGAGGA--GA-AGCTCCGTTTGTTGAACGCCATCGAGACGATG 116968 || || | ||| | ||| | || || || ||||| || || || || ||||| Sbjct 410929 ACCTATATCCGCGAGCCAGAGCAACGAGAGTTC---TTGTTCAATGCTATTGAAACGATC 410873 Query 116969 CCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC 117028 || || ||| | || || |||||||| |||| |||||| | | | ||| | Sbjct 410872 CCTGTAGTGAAACAAAAAGCAGAGTGGGCATTGCGGTGGATCAATGACCAACGCGCCTCG 410813 Query 117029 TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTC 117088 || || || || || || || || || || || || |||| || ||||| || Sbjct 410812 TTTTCTGAACGTCTCGTAGCATTTGCTGCTGTGGAAGGGATCTTTTTCTCGGGATCCTTT 410753 Query 117089 GCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAG 117148 ||| | || || ||||| || || || || | ||||| || || | ||| || || Sbjct 410752 GCCTCGATTTTCTGGCTGAAAAAGCGTGGATTGATGCCGGGACTTTCCTTCTCTAATGAA 410693 Query 117149 CTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTT 117198 || ||||| | || || ||| |||| |||||||||||| |||||||| Sbjct 410692 CTGATCTCGCGAGATGAAGGTTTGCACACCGACTTTGCCTGCTTGCTGTT 410643 >seq17 Length=3070003 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || | || ||||| ||||| || | || ||||| | | Sbjct 1437352 ATGCAAGTTTTCGTGAAGACATTGACTGGCAAGACCATTACTTTGGAAGTCGAGTCTTCT 1437411 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | || ||||| |||||| || || | |||||||||||||| || ||||||| Sbjct 1437412 GATACGATTGAAAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATTCCTCCGGACCA 1437470 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || |||| || || ||||| || || |||| || ||| | | |||||||| Sbjct 1437471 ACAACGTCTTATCTTTGCCGGAAAACAACTTGAGGACGGACGTACCTTGAGTGACTACAA 1437530 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || ||||| || Sbjct 1437531 CATCCAGAAGGAGTCTACTCTTCATCTGGT 1437560 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || | || ||||| ||||| || | || || ||| | | Sbjct 1437580 ATGCAAGTCTTCGTCAAGACATTGACTGGCAAGACCATTACTTTGGAAGTTGAATCTTCT 1437639 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | ||| | |||| || || | |||||||||||||| || ||||||| Sbjct 1437640 GATACGATCGAAAATGTTAAGGCTAAGATCCAAGACAAAGAGGGCATTCCTCCGGACCAA 1437699 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || |||| || || ||||| || || |||| | || |||| |||||||||| Sbjct 1437700 CAACGTCTTATCTTTGCCGGAAAACAACTCGAAGACGGAAGAACACTCAGCGACTACAAC 1437759 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || ||||| ||| | || || | ||||| Sbjct 1437760 ATCCAGAAGGAGTCTACTCTTCATCTGGTGCTACGTCTGCGAGGCGG 1437806 >seq27 Length=1447875 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || || ||||| || || || ||| | || || ||| || | Sbjct 354330 ATGCAAGTGTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTTGAGGTGGAATCCTCT 354271 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| |||||| ||| || | ||||| || || || || |||| || Sbjct 354270 GACACGATCGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCAA 354211 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | |||| || || || |||||||| || | || || | | |||||||||| Sbjct 354210 CAGCGATTGATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGTACTTTGAGCGACTACAAC 354151 Query 40870 ATCCAGAAGGA 40880 ||||||||||| Sbjct 354150 ATCCAGAAGGA 354140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218884428240