Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq38 102 9e-17
seq27 102 9e-17
>seq38
Length=944797
Score = 102 bits (112), Expect = 9e-17
Identities = 153/213 (72%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
|||||| ||||| ||||| |||||||| || ||||| ||| || || || | || ||
Sbjct 91207 CACCAAGTGCAAAGTGCTTTCCTTTTGGATGTTGTAGTCACTCAATGTACGGCCATCTTC 91148
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
|| ||||| || || || || | || |||||||| | || | | ||| |||||| |
Sbjct 91147 CAGTTGCTTTCCGGCAAAAATCAACCGTTGCTGGTCCGGAGGAATACCCTCTTTGTCC-T 91089
Query 43094 GATTTTTTGT-TTGAG--CGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150
|| || | || | | ||| | ||||||||| ||||| || || | |||||| ||
Sbjct 91088 GAACCTTGGACTTCACTACATCG--ATCGTGTCGCTGGATTCAACCTCCAGCGTGATCGT 91031
Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||| || || ||||| | ||||||||||||
Sbjct 91030 CTTGCCAGTCAGTGTCTTGATAAAGATTTGCAT 90998
>seq27
Length=1447875
Score = 102 bits (112), Expect = 9e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||| | |||||| ||||| ||||| ||||| || || ||||| || || ||| || |
Sbjct 354115 ACGGAGCACCAAGTGCAAAGTGCTTTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGACC 354174
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || |||||||||||||| || || | |||||| || || | || | | |||||
Sbjct 354175 ATCTTCCAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGAGGAATACCTTCCTT 354234
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
|||| ||| ||| |||| | | | |||||| |||||||| || | || ||
Sbjct 354235 GTCCTGGATCTTTGCCTTGACATTTTCGATCGTGTCAGAGGATTCCACCTCAAGGGTAAT 354294
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || ||||| || ||||| || || | ||||||
Sbjct 354295 CGTCTTACCCGTCAGGGTCTTGACGAACACTTGCAT 354330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571817249761720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |