Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq45 185 1e-41
>seq45
Length=461343
Score = 185 bits (204), Expect = 1e-41
Identities = 404/601 (67%), Gaps = 8/601 (1%)
Strand=Plus/Plus
Query 33571 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAG 33630
|||||| ||| || || || ||| ||||| ||| || |||| || | ||| ||||
Sbjct 410641 TAAACAGCAAGCAGGCAAAGTCGGTGTGCAAACCTTCATCTCGCGAGATCAGTTCATTAG 410700
Query 33631 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATC 33690
| || | ||||| ||||| | ||||||||||| ||||| || || || || || ||||
Sbjct 410701 AGAAGGAAAGTCCCGGCATCAATCCACGCTTTTTCAGCCAGAAAATCGAGGCAAAGGATC 410760
Query 33691 CGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC 33750
| || || ||||| ||||| || |||||||| || | || | || | | |||||
Sbjct 410761 CCGAGAAAAAGATCCCTTCCACAGCAGCAAATGCTACGAGACGTTCAGAAAACGAGGCGC 410820
Query 33751 T---GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 33807
||||| |||||| ||||| || || || | ||| || ||| |||||||
Sbjct 410821 GTTGGTCATTGATCCACCGCAATGCCCACTCTGCTTTTTGTTTCACTACAGGGATCGTTT 410880
Query 33808 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 33867
| || ||||| || | | | | || | || | ||| ||||||||||| |
Sbjct 410881 CAATAGCATTGAACAAGAACTCTCGTTGCTCTGGCTCGCGGATATAGGTATCGATCAATA 410940
Query 33868 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 33927
| || ||||||| || ||||| ||||| || || || || |||||||| | |
Sbjct 410941 GCGAGTAGGTTTCCGAGTGGATGTTCTCAATCATGATTTGGAAGCCATAGAAACAGCGCG 411000
Query 33928 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCAT 33987
| || | | |||||||| | | |||||||| | ||| || || || || || |
Sbjct 411001 CTTCAGCAGCTTGCACTTCGTTGCTGAATCGTTCCAAGAGATTCTCGTTAACAATCCCGT 411060
Query 33988 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT 34046
| ||| || |||||||||| ||||| | ||||| | | || | || ||| | |
Sbjct 411061 CCGAGGCCGCGAAAAACGCCAGCACATGACTGATAAAGTGTCGCTCAT-TGTCGTTCAAT 411119
Query 34047 TTATT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 34103
|| || |||||||| | ||| || || | || | ||||||| | ||||| || ||
Sbjct 411120 TTGTTGTCCCAATCATGCAGATCCTTGGACAAGTCGATTTCTTCCGCAGTCCAGAAAGAA 411179
Query 34104 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAAT 34163
|| || ||||| || ||||| | ||| || ||||| ||| |||| || || | ||||||
Sbjct 411180 GCTTCAGCCTTCTTGTACATTTGCCAAATCTCATGGTATCGGATGGGAAACAGTACAAAT 411239
Query 34164 C 34164
|
Sbjct 411240 C 411240
Score = 181 bits (200), Expect = 1e-40
Identities = 421/635 (66%), Gaps = 0/635 (0%)
Strand=Plus/Minus
Query 63228 TCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCA 63287
||| | ||||||||||| | ||| || ||| | | || || || |||||| | ||
Sbjct 424959 TCAGCAGGACACATCAAAGTCCAGTCGCCGCCCTGCTCGACACGACGCATAAACAAGTCT 424900
Query 63288 GGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTT 63347
|| ||||| | || ||| | || | | | | ||| || ||||| ||||||
Sbjct 424899 GGCATCCACAATGCATAAAACAAGTCGCGAGCGCGAACTTCTTCTTTTCCGTGGTTCTTT 424840
Query 63348 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACT 63407
|| || |||||| | | | || |||||||| || |||| ||| || || | | |
Sbjct 424839 CGGAGGTCAAGGAACTCGAACACGTCCGAATGCCAAGGCTCCAGGTAGATAGCAAAAGCA 424780
Query 63408 CCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 63467
||||| || ||||| || || ||||| | ||| | || ||||| ||| | || | | |
Sbjct 424779 CCAGGACGCTTGTTGCCACCTTGATCGACGTAGCGTGCAGTGTTGTTAAACACACGGAGC 424720
Query 63468 ATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGA 63527
|| |||| ||| ||||| | ||||||||||||| || || || || | ||
Sbjct 424719 ATAGGAACAATCCCGTTGCTAACGCCATTGGTACCGGCAATGTAAGAGCCCGTGCCGCGG 424660
Query 63528 ATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT 63587
||||| || | ||| ||||| || || |||| ||||| | || || |||
Sbjct 424659 ATATTGTGGATATGCAAACCGATTCCACCGGCGGTTTTCGAGATCATCGCACAAGATTTG 424600
Query 63588 AACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGAC 63647
| |||||||| |||||||| ||| ||| || |||| | | ||||| ||||
Sbjct 424599 AGTGTGTCATAAATGCCTTCGATGGAATCGTCCTTCATCCCGACCAAGAAACAAGAAGAC 424540
Query 63648 ATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 63707
||||| || | ||||| ||||| |||| || ||||| || ||||| ||| |||
Sbjct 424539 ATTTGTGGATTCGGCGTTCCAGCATTGAATAGAGTCGGAGATGCATGCGTGAACGCCTTT 424480
Query 63708 TCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACT 63767
|| || | | ||||| ||||| || || |||| || || ||||| |||
Sbjct 424479 TCGGACATCATGTTGTATGTCTCGATGGCGCTTTCTACGTCTTCGCCGTGGATTCCCACT 424420
Query 63768 GCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAG 63827
||||||||||| | ||| || ||||| | ||| ||| |||| ||| || || ||||
Sbjct 424419 GCGACACGCATCAGCATATGTTGAGGACGTTCGGCAACTTTGCCGTTGATACGCAGCAAG 424360
Query 63828 TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 63862
|||||| || | || || || |||||| ||||
Sbjct 424359 TAGGATCGCTCTAGTGTCTTGAAGCCAAAAAAGTT 424325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817214236720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |