Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq45 163 4e-35 >seq45 Length=461343 Score = 163 bits (180), Expect = 4e-35 Identities = 410/618 (66%), Gaps = 10/618 (2%) Strand=Plus/Plus Query 36147 TAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGG 36206 |||||| ||| || || || ||| ||| | ||| || |||| || | ||| || | Sbjct 410641 TAAACAGCAAGCAGGCAAAGTCGGTGTGCAAACCTTCATCTCGCGAGATCAGTTCATTAG 410700 Query 36207 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATC 36266 | || | ||||| ||||| | ||||||||||| ||||| || || || ||||| |||| Sbjct 410701 AGAAGGAAAGTCCCGGCATCAATCCACGCTTTTTCAGCCAGAAAATCGAGGCAAAGGATC 410760 Query 36267 CAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC 36326 | || || || || ||||| || || ||||| || | || | || | | ||| | Sbjct 410761 CCGAGAAAAAGATCCCTTCCACAGCAGCAAATGCTACGAGACGTTCAGAAAACGAGGCGC 410820 Query 36327 ---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 36383 ||||| |||||| ||||| || || || | ||| || ||| || || | Sbjct 410821 GTTGGTCATTGATCCACCGCAATGCCCACTCTGCTTTTTGTTTCACTACAGGGATCGTTT 410880 Query 36384 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 36443 | |||||||| || | | | | || | || | ||| ||||| ||||| | Sbjct 410881 CAATAGCATTGAACAAGAACTCTCGTTGCTCTGGCTCGCGGATATAGGTATCGATCAATA 410940 Query 36444 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAG 36503 | || ||||||| || ||||| ||||| ||||| || || |||||||| | | Sbjct 410941 GCGAGTAGGTTTCCGAGTGGATGTTCTCAATCATGATTTGGAAGCCATAGAAACAGCGCG 411000 Query 36504 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 36563 | || | | || ||||| | | |||||||| | ||| || || || || |||| Sbjct 411001 CTTCAGCAGCTTGCACTTCGTTGCTGAATCGTTCCAAGAGATTCTCGTTAACAATCCCGT 411060 Query 36564 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGTGTTAGT 36622 | ||| || |||||||||| ||||| | ||||| | | || || | || | | | Sbjct 411061 CCGAGGCCGCGAAAAACGCCAGCACATGACTGATAAAGTGTCGCTCATTGTCGT-TCAAT 411119 Query 36623 TTATT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 36679 || || |||||||| | ||| || || | || | ||||||| | ||||| || || Sbjct 411120 TTGTTGTCCCAATCATGCAGATCCTTGGACAAGTCGATTTCTTCCGCAGTCCAGAAAGAA 411179 Query 36680 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAAT 36739 || || ||||| || ||||| | ||| || ||||| ||| | || ||||| | |||||| Sbjct 411180 GCTTCAGCCTTCTTGTACATTTGCCAAATCTCATGGTATCGGATGGGAAACAGTACAAAT 411239 Query 36740 CTATTTTGATTTTTTGCA 36757 | |||| | |||| || Sbjct 411240 C--GTTTGTTGTTTTCCA 411255 Score = 147 bits (162), Expect = 3e-30 Identities = 416/637 (65%), Gaps = 4/637 (1%) Strand=Plus/Minus Query 66021 TCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCA 66080 ||| | ||||||||||| | ||| || ||| | | || || || |||||| | || Sbjct 424959 TCAGCAGGACACATCAAAGTCCAGTCGCCGCCCTGCTCGACACGACGCATAAACAAGTCT 424900 Query 66081 GGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT 66140 || ||||| | || ||| || || | | | | ||| || ||||| |||||| Sbjct 424899 GGCATCCACAATGCATAAAACAAGTCGCGAGCGCGAACTTCTTCTTTTCCGTGGTTCTTT 424840 Query 66141 TTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACT 66200 || || |||||| | | | || ||||||| || |||| ||| || || | | | Sbjct 424839 CGGAGGTCAAGGAACTCGAACACGTCCGAATGCCAAGGCTCCAGGTAGATAGCAAAAGCA 424780 Query 66201 CCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 66260 ||||| || ||||| || || ||||| | ||| | || ||||| ||| | || | | | Sbjct 424779 CCAGGACGCTTGTTGCCACCTTGATCGACGTAGCGTGCAGTGTTGTTAAACACACGGAGC 424720 Query 66261 ATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGA 66320 || |||| ||| || ||| |||||||| |||| || || || | | || Sbjct 424719 ATAGGAACAATCCCGTTGCTAACGCCATTGGTACCGGCAATGTAAGAGCCCGTGCCGCGG 424660 Query 66321 ATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT 66380 ||||| || | ||| ||||| || || |||| ||||| | || || ||| Sbjct 424659 ATATTGTGGATATGCAAACCGATTCCACCGGCGGTTTTCGAGATCATCGCACAAGATTTG 424600 Query 66381 AACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGAC 66440 | || ||||| ||||| || || ||| ||| |||| | | ||||| |||| Sbjct 424599 AGTGTGTCATAAATGCCTTCGATGGAATCGTCCTTCATCCCGACCAAGAAACAAGAAGAC 424540 Query 66441 ATTTGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 66498 ||||| || || | ||||| ||||| |||| || ||||| || ||||| ||| | Sbjct 424539 ATTTGTGGATTCGGC--GTTCCAGCATTGAATAGAGTCGGAGATGCATGCGTGAACGCCT 424482 Query 66499 TTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTA 66558 |||| || | | ||||| ||||| || || |||| || || ||||| | Sbjct 424481 TTTCGGACATCATGTTGTATGTCTCGATGGCGCTTTCTACGTCTTCGCCGTGGATTCCCA 424422 Query 66559 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 66618 ||||||||||||| | ||| || ||||| | ||| | | ||| ||| || || || Sbjct 424421 CTGCGACACGCATCAGCATATGTTGAGGACGTTCGGCAACTTTGCCGTTGATACGCAGCA 424362 Query 66619 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 66655 |||||||| || | || || || |||||| |||| Sbjct 424361 AGTAGGATCGCTCTAGTGTCTTGAAGCCAAAAAAGTT 424325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172396869160