Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq45 145 8e-30
seq27 105 7e-18
>seq45
Length=461343
Score = 145 bits (160), Expect = 8e-30
Identities = 360/537 (67%), Gaps = 17/537 (3%)
Strand=Plus/Minus
Query 52514 AGCATCAAGACTTGATACTCAACGCTTTTGACAATGTTCCGTGT-GTGCG-CAAAAAGGA 52571
|||| | ||| || | |||| ||| |||| || | ||| ||| ||| ||||||| |
Sbjct 410910 AGCAACGAGAGTTCTTGTTCAATGCTATTGA-AACGATCCCTGTAGTGAAACAAAAAGCA 410852
Query 52572 TGATTGGGCATTGAAATGGATCGAAAACGACAAA---GCCACTTTTGCCGAACGTCTGGT 52628
|| ||||||||| |||||| || ||| || ||| | ||| | |||||||| ||
Sbjct 410851 -GAGTGGGCATTGCGGTGGATC---AATGACCAACGCGCCTCGTTTTCTGAACGTCTCGT 410796
Query 52629 CGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTTACAT 52688
|| |||||| |||||||| | ||||| ||||| ||||| | || || | |
Sbjct 410795 AGCATTTGCTGCTGTGGAAGGGATCTTTTTCTCGGGATCCTTTGCCTCGATTTTCTGGCT 410736
Query 52689 CAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGA 52748
|||| || | ||||| || || | || || || |||| ||||| || ||
Sbjct 410735 GAAAAAGCGTGGATTGATGCCGGGACTTTCCTTCTCTAATGAACTGATCTCGCGAGATGA 410676
Query 52749 AGGAATGCACACAGATTTTGCGTGTTTGTATTATAATACGCGCGTTAAAGAAAAATTGTC 52808
||| ||||||| || ||||| || ||| | || || || |||||| | |
Sbjct 410675 AGGTTTGCACACCGACTTTGCCTGCTTGCTGTTTA----GCCACTTGAAGAAACGTGCAC 410620
Query 52809 ATATGAAAAAATTCTA--GACATGTTTAAAGAGGCCGTCGACATTGAAAAAGAGTTTTTT 52866
| | | || | || || ||| ||||| || | ||| || || | |||||
Sbjct 410619 ACCCAGACACGGTCAACCGA-ATTATTACGGAGGCTGTTGGCATCGAGCAAAACTTTTTG 410561
Query 52867 ACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGCGAGTACATC 52926
|||| || || || || || ||| | |||||||| || | | ||||| |||||||
Sbjct 410560 TCGGATGCCTTGCCAGTGTCGTTGATCGGCATGAATGCAAGACTCATGTGTCAGTACATT 410501
Query 52927 GAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGTCAGCCGAAATACTATAATGCGCGT 52986
|| ||||||||||| | || || || | | ||| | ||||| ||||||||||
Sbjct 410500 GAATTTGTTGCGGATCGTTTGCTGGTGGCGTTGGGTAACCCGAAGCACTATAATGCTACG 410441
Query 52987 AACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTTTTCGAG 53043
||||||||| |||||| | ||||| |||||| | |||||| | ||||||||||||
Sbjct 410440 AACCCCTTTGACTTTATGGAGAACATTTCGCTCCAAGGCAAATCGAACTTTTTCGAG 410384
>seq27
Length=1447875
Score = 105 bits (116), Expect = 7e-18
Identities = 114/150 (76%), Gaps = 1/150 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|||||||| || || | |||| || | ||||| || ||||| || || |||||||||
Sbjct 258032 CCGCCTCGCAATCGAAGTACTAGATGTAATGTAGATTCCTTTTGGATATTGTAATCGCTC 257973
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||| | ||| || ||||||||||||||| |||| |||||||| ||||| || ||
Sbjct 257972 AATGTACGACCGTCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGTTGATCCGGTGGG 257913
Query 139658 ATGCCTTCTTTGTCGGTGAttttttgtttt 139687
|| |||||||| || || |||| |||||
Sbjct 257912 ATTCCTTCTTTATC-TTGTATTTTGGTTTT 257884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063696160800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |