Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq45 145 8e-30 seq27 105 7e-18 >seq45 Length=461343 Score = 145 bits (160), Expect = 8e-30 Identities = 360/537 (67%), Gaps = 17/537 (3%) Strand=Plus/Minus Query 52514 AGCATCAAGACTTGATACTCAACGCTTTTGACAATGTTCCGTGT-GTGCG-CAAAAAGGA 52571 |||| | ||| || | |||| ||| |||| || | ||| ||| ||| ||||||| | Sbjct 410910 AGCAACGAGAGTTCTTGTTCAATGCTATTGA-AACGATCCCTGTAGTGAAACAAAAAGCA 410852 Query 52572 TGATTGGGCATTGAAATGGATCGAAAACGACAAA---GCCACTTTTGCCGAACGTCTGGT 52628 || ||||||||| |||||| || ||| || ||| | ||| | |||||||| || Sbjct 410851 -GAGTGGGCATTGCGGTGGATC---AATGACCAACGCGCCTCGTTTTCTGAACGTCTCGT 410796 Query 52629 CGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTTACAT 52688 || |||||| |||||||| | ||||| ||||| ||||| | || || | | Sbjct 410795 AGCATTTGCTGCTGTGGAAGGGATCTTTTTCTCGGGATCCTTTGCCTCGATTTTCTGGCT 410736 Query 52689 CAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGA 52748 |||| || | ||||| || || | || || || |||| ||||| || || Sbjct 410735 GAAAAAGCGTGGATTGATGCCGGGACTTTCCTTCTCTAATGAACTGATCTCGCGAGATGA 410676 Query 52749 AGGAATGCACACAGATTTTGCGTGTTTGTATTATAATACGCGCGTTAAAGAAAAATTGTC 52808 ||| ||||||| || ||||| || ||| | || || || |||||| | | Sbjct 410675 AGGTTTGCACACCGACTTTGCCTGCTTGCTGTTTA----GCCACTTGAAGAAACGTGCAC 410620 Query 52809 ATATGAAAAAATTCTA--GACATGTTTAAAGAGGCCGTCGACATTGAAAAAGAGTTTTTT 52866 | | | || | || || ||| ||||| || | ||| || || | ||||| Sbjct 410619 ACCCAGACACGGTCAACCGA-ATTATTACGGAGGCTGTTGGCATCGAGCAAAACTTTTTG 410561 Query 52867 ACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGCGAGTACATC 52926 |||| || || || || || ||| | |||||||| || | | ||||| ||||||| Sbjct 410560 TCGGATGCCTTGCCAGTGTCGTTGATCGGCATGAATGCAAGACTCATGTGTCAGTACATT 410501 Query 52927 GAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGTCAGCCGAAATACTATAATGCGCGT 52986 || ||||||||||| | || || || | | ||| | ||||| |||||||||| Sbjct 410500 GAATTTGTTGCGGATCGTTTGCTGGTGGCGTTGGGTAACCCGAAGCACTATAATGCTACG 410441 Query 52987 AACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTTTTCGAG 53043 ||||||||| |||||| | ||||| |||||| | |||||| | |||||||||||| Sbjct 410440 AACCCCTTTGACTTTATGGAGAACATTTCGCTCCAAGGCAAATCGAACTTTTTCGAG 410384 >seq27 Length=1447875 Score = 105 bits (116), Expect = 7e-18 Identities = 114/150 (76%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 |||||||| || || | |||| || | ||||| || ||||| || || ||||||||| Sbjct 258032 CCGCCTCGCAATCGAAGTACTAGATGTAATGTAGATTCCTTTTGGATATTGTAATCGCTC 257973 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| | ||| || ||||||||||||||| |||| |||||||| ||||| || || Sbjct 257972 AATGTACGACCGTCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGTTGATCCGGTGGG 257913 Query 139658 ATGCCTTCTTTGTCGGTGAttttttgtttt 139687 || |||||||| || || |||| ||||| Sbjct 257912 ATTCCTTCTTTATC-TTGTATTTTGGTTTT 257884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063696160800