Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq45 196 7e-45 >seq45 Length=461343 Score = 196 bits (216), Expect = 7e-45 Identities = 404/600 (67%), Gaps = 6/600 (1%) Strand=Plus/Plus Query 49949 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGG 50008 |||||| ||| || || || ||| ||||| ||| || |||| || ||||| || | Sbjct 410641 TAAACAGCAAGCAGGCAAAGTCGGTGTGCAAACCTTCATCTCGCGAGATCAGTTCATTAG 410700 Query 50009 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACC 50068 | || | ||||| ||||| | ||||||||||| ||||| || || || ||||| || | Sbjct 410701 AGAAGGAAAGTCCCGGCATCAATCCACGCTTTTTCAGCCAGAAAATCGAGGCAAAGGATC 410760 Query 50069 CAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC 50128 | || || ||||| ||||| || || ||||| || || || | || | | ||||| Sbjct 410761 CCGAGAAAAAGATCCCTTCCACAGCAGCAAATGCTACGAGACGTTCAGAAAACGAGGCGC 410820 Query 50129 T---GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185 ||||| |||||| ||||| || || || | ||| || ||| ||||||| Sbjct 410821 GTTGGTCATTGATCCACCGCAATGCCCACTCTGCTTTTTGTTTCACTACAGGGATCGTTT 410880 Query 50186 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 50245 | || ||||| || | | | | || | || | ||| ||||||||||| | Sbjct 410881 CAATAGCATTGAACAAGAACTCTCGTTGCTCTGGCTCGCGGATATAGGTATCGATCAATA 410940 Query 50246 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 50305 | || ||||||| || ||||| ||||| || || || || |||||||| | | Sbjct 410941 GCGAGTAGGTTTCCGAGTGGATGTTCTCAATCATGATTTGGAAGCCATAGAAACAGCGCG 411000 Query 50306 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGT 50365 | || | | |||||||| | | |||||||| | ||| || || || || |||| Sbjct 411001 CTTCAGCAGCTTGCACTTCGTTGCTGAATCGTTCCAAGAGATTCTCGTTAACAATCCCGT 411060 Query 50366 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTT 50425 | ||| || |||||||||| ||||| | ||||| ||| || ||| | | || Sbjct 411061 CCGAGGCCGCGAAAAACGCCAGCACATGACTGATAAAGTGTCGCTCATTGTCGTTCAATT 411120 Query 50426 TATT---CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATG 50482 | || |||||||| | ||| || || | || | ||||||| | ||||| || || | Sbjct 411121 TGTTGTCCCAATCATGCAGATCCTTGGACAAGTCGATTTCTTCCGCAGTCCAGAAAGAAG 411180 Query 50483 CCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATC 50542 | || ||||| || ||||| | ||| || ||||| ||| |||| || || | ||||||| Sbjct 411181 CTTCAGCCTTCTTGTACATTTGCCAAATCTCATGGTATCGGATGGGAAACAGTACAAATC 411240 Score = 136 bits (150), Expect = 6e-27 Identities = 422/651 (65%), Gaps = 4/651 (1%) Strand=Plus/Minus Query 79886 CTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTT 79945 |||| || ||| || ||||||||||||| | ||| || || | | || || || Sbjct 424973 CTAAGCCTGGAGCCTCAGCAGGACACATCAAAGTCCAGTCGCCGCCCTGCTCGACACGAC 424914 Query 79946 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGT 80005 |||||| | || || ||||| | || ||| | || | | | | || || | Sbjct 424913 GCATAAACAAGTCTGGCATCCACAATGCATAAAACAAGTCGCGAGCGCGAACTTCTTCTT 424854 Query 80006 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 80065 |||| |||||| || || |||||| | | | || |||||||| || |||| || Sbjct 424853 TTCCGTGGTTCTTTCGGAGGTCAAGGAACTCGAACACGTCCGAATGCCAAGGCTCCAGGT 424794 Query 80066 ATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 80125 | || || | | | || || || ||||| || || ||||| | ||| | || ||||| | Sbjct 424793 AGATAGCAAAAGCACCAGGACGCTTGTTGCCACCTTGATCGACGTAGCGTGCAGTGTTGT 424734 Query 80126 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGC 80185 || | || | | ||| |||| ||| || ||| |||||||| |||| || || Sbjct 424733 TAAACACACGGAGCATAGGAACAATCCCGTTGCTAACGCCATTGGTACCGGCAATGTAAG 424674 Query 80186 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 80245 || || | || ||||| || | ||| ||||| || || |||| ||||| | Sbjct 424673 AGCCCGTGCCGCGGATATTGTGGATATGCAAACCGATTCCACCGGCGGTTTTCGAGATCA 424614 Query 80246 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTA 80305 || || ||| | || ||||| ||||| || ||| ||| || |||| | | Sbjct 424613 TCGCACAAGATTTGAGTGTGTCATAAATGCCTTCGATGGAATCGTCCTTCATCCCGACCA 424554 Query 80306 GAAAACAGCTAGACATTTGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 80363 ||||| ||||||||| || || | ||||| ||||| |||| || ||||| || Sbjct 424553 AGAAACAAGAAGACATTTGTGGATTCGGC--GTTCCAGCATTGAATAGAGTCGGAGATGC 424496 Query 80364 GTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCA 80423 ||||| ||| ||||| |||| | ||||| ||||| || || ||||| || Sbjct 424495 ATGCGTGAACGCCTTTTCGGACATCATGTTGTATGTCTCGATGGCGCTTTCTACGTCTTC 424436 Query 80424 TTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 80483 || ||||| || ||||||||||| | ||| || ||||| | ||| | | ||| Sbjct 424435 GCCGTGGATTCCCACTGCGACACGCATCAGCATATGTTGAGGACGTTCGGCAACTTTGCC 424376 Query 80484 ATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 80534 || || || |||||| ||| || | || || || |||||| |||| Sbjct 424375 GTTGATACGCAGCAAGTAGGATCGCTCTAGTGTCTTGAAGCCAAAAAAGTT 424325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268360060360