Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq38 91.5 1e-13 seq27 89.7 4e-13 >seq38 Length=944797 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/215 (70%), Gaps = 10/215 (5%) Strand=Plus/Minus Query 42900 CACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTC 42959 |||||| || | |||||| |||||||| | ||||| || ||||||||| | || || Sbjct 91207 CACCAAGTGCAAAGTGCTTTCCTTTTGGATGTTGTAGTCACTCAATGTACGGCCATCTTC 91148 Query 42960 CAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCT 43019 || ||| || |||||||||||||| || || || || | || | ||| ||||| || || Sbjct 91147 CAGTTGCTTTCCGGCAAAAATCAACCGTTGCTGGTCCGGAGGAATACCCTCTTTGTC-CT 91089 Query 43020 GATCAACTCTTTGACT---CTGC--CAACTGTGTCGCCAGCCTCGACGTCTACCGTTATA 43074 || | ||| |||| || | | | ||||||| | || || || | ||| || Sbjct 91088 GAAC----CTTGGACTTCACTACATCGATCGTGTCGCTGGATTCAACCTCCAGCGTGATC 91033 Query 43075 GTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || || || || || | ||| |||||||| Sbjct 91032 GTCTTGCCAGTCAGTGTCTTGATAAAGATTTGCAT 90998 >seq27 Length=1447875 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || |||||||| | | |||||| || | |||||| ||||| || | ||||| ||| | Sbjct 354104 CCACCACGCAGACGGAGCACCAAGTGCAAAGTGCTTTCCTTCTGGATGTTGTAGTCGCTC 354163 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || ||||| | || |||| || || || ||||| ||||||||||||||||| | || Sbjct 354164 AAAGTACGACCATCTTCCAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGAGGA 354223 Query 43003 ACACCTTCTTTTTC 43016 | |||||| || || Sbjct 354224 ATACCTTCCTTGTC 354237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369372250842