Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq45 181 1e-40 >seq45 Length=461343 Score = 181 bits (200), Expect = 1e-40 Identities = 403/601 (67%), Gaps = 8/601 (1%) Strand=Plus/Plus Query 42054 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGG 42113 |||||| ||| || || || ||| ||||| ||| ||||||| || | ||| || | Sbjct 410641 TAAACAGCAAGCAGGCAAAGTCGGTGTGCAAACCTTCATCTCGCGAGATCAGTTCATTAG 410700 Query 42114 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATC 42173 | || | ||||| ||||| | ||||||||||| ||||| || || || ||||| |||| Sbjct 410701 AGAAGGAAAGTCCCGGCATCAATCCACGCTTTTTCAGCCAGAAAATCGAGGCAAAGGATC 410760 Query 42174 CAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC 42233 | || || ||||| ||||| || || ||||| || | || | || | | ||| | Sbjct 410761 CCGAGAAAAAGATCCCTTCCACAGCAGCAAATGCTACGAGACGTTCAGAAAACGAGGCGC 410820 Query 42234 T---GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 42290 ||||| |||||| ||||| || || || | ||| || ||| ||||||| Sbjct 410821 GTTGGTCATTGATCCACCGCAATGCCCACTCTGCTTTTTGTTTCACTACAGGGATCGTTT 410880 Query 42291 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAA 42350 | || ||||| || | | | | || | || | ||| ||||||||||| | Sbjct 410881 CAATAGCATTGAACAAGAACTCTCGTTGCTCTGGCTCGCGGATATAGGTATCGATCAATA 410940 Query 42351 GACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGG 42410 | || |||| || || ||||| ||||| || || || || |||||||| | | Sbjct 410941 GCGAGTAGGTTTCCGAGTGGATGTTCTCAATCATGATTTGGAAGCCATAGAAACAGCGCG 411000 Query 42411 CCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGT 42470 | || | | | || ||||| | | |||||||| | ||| ||||| || || |||| Sbjct 411001 CTTCAGCAGCTTGCACTTCGTTGCTGAATCGTTCCAAGAGATTCTCGTTAACAATCCCGT 411060 Query 42471 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTT-AAT 42529 | ||| || |||||||||| ||||| | ||||| | | || | | ||| ||| Sbjct 411061 CCGAGGCCGCGAAAAACGCCAGCACATGACTGATAAAGTGTCGCTCAT-TGTCGTTCAAT 411119 Query 42530 TTATT---CCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGAT 42586 || || |||||||| | ||| || || | || | |||||| | ||||| || || Sbjct 411120 TTGTTGTCCCAATCATGCAGATCCTTGGACAAGTCGATTTCTTCCGCAGTCCAGAAAGAA 411179 Query 42587 GCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAAT 42646 ||||| ||||| || ||||| | ||| || ||||| ||| | || || || | |||||| Sbjct 411180 GCTTCAGCCTTCTTGTACATTTGCCAAATCTCATGGTATCGGATGGGAAACAGTACAAAT 411239 Query 42647 C 42647 | Sbjct 411240 C 411240 Score = 149 bits (164), Expect = 8e-31 Identities = 348/523 (67%), Gaps = 4/523 (1%) Strand=Plus/Minus Query 72097 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 72156 |||||| || || |||||| | | | || |||||||| || |||| ||| || || Sbjct 424845 TTCTTTCGGAGGTCAAGGAACTCGAACACGTCCGAATGCCAAGGCTCCAGGTAGATAGCA 424786 Query 72157 ATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 72216 | | | || || || ||||| || || ||||| | ||| | || ||||| ||| | || Sbjct 424785 AAAGCACCAGGACGCTTGTTGCCACCTTGATCGACGTAGCGTGCAGTGTTGTTAAACACA 424726 Query 72217 CTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTG 72276 | | ||| |||| ||| || ||| | |||||||| |||| || || || || Sbjct 424725 CGGAGCATAGGAACAATCCCGTTGCTAACGCCATTGGTACCGGCAATGTAAGAGCCCGTG 424666 Query 72277 GCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 72336 | || |||||| || | ||| ||||| || || |||| ||||| | || || Sbjct 424665 CCGCGGATATTGTGGATATGCAAACCGATTCCACCGGCGGTTTTCGAGATCATCGCACAA 424606 Query 72337 CGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAG 72396 ||| | || ||||| ||||| || || ||| ||| |||| | | ||||| Sbjct 424605 GATTTGAGTGTGTCATAAATGCCTTCGATGGAATCGTCCTTCATCCCGACCAAGAAACAA 424546 Query 72397 CTAGACATTTGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 72454 ||||||||| || || | ||||| ||||| |||| || ||||| || ||||| | Sbjct 424545 GAAGACATTTGTGGATTCGGC--GTTCCAGCATTGAATAGAGTCGGAGATGCATGCGTGA 424488 Query 72455 ACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTA 72514 || ||||| |||| | ||||| ||||| || || ||||| || || | Sbjct 424487 ACGCCTTTTCGGACATCATGTTGTATGTCTCGATGGCGCTTTCTACGTCTTCGCCGTGGA 424428 Query 72515 TTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTT 72574 |||| || ||||||||||| | |||||| ||||| | ||| | | ||| || || Sbjct 424427 TTCCCACTGCGACACGCATCAGCATATGTTGAGGACGTTCGGCAACTTTGCCGTTGATAC 424368 Query 72575 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 72617 || |||||||||| || | || || || |||||| |||| Sbjct 424367 GCAGCAAGTAGGATCGCTCTAGTGTCTTGAAGCCAAAAAAGTT 424325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138788927240