Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq45 181 1e-40
>seq45
Length=461343
Score = 181 bits (200), Expect = 1e-40
Identities = 403/601 (67%), Gaps = 8/601 (1%)
Strand=Plus/Plus
Query 42054 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGG 42113
|||||| ||| || || || ||| ||||| ||| ||||||| || | ||| || |
Sbjct 410641 TAAACAGCAAGCAGGCAAAGTCGGTGTGCAAACCTTCATCTCGCGAGATCAGTTCATTAG 410700
Query 42114 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATC 42173
| || | ||||| ||||| | ||||||||||| ||||| || || || ||||| ||||
Sbjct 410701 AGAAGGAAAGTCCCGGCATCAATCCACGCTTTTTCAGCCAGAAAATCGAGGCAAAGGATC 410760
Query 42174 CAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC 42233
| || || ||||| ||||| || || ||||| || | || | || | | ||| |
Sbjct 410761 CCGAGAAAAAGATCCCTTCCACAGCAGCAAATGCTACGAGACGTTCAGAAAACGAGGCGC 410820
Query 42234 T---GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 42290
||||| |||||| ||||| || || || | ||| || ||| |||||||
Sbjct 410821 GTTGGTCATTGATCCACCGCAATGCCCACTCTGCTTTTTGTTTCACTACAGGGATCGTTT 410880
Query 42291 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAA 42350
| || ||||| || | | | | || | || | ||| ||||||||||| |
Sbjct 410881 CAATAGCATTGAACAAGAACTCTCGTTGCTCTGGCTCGCGGATATAGGTATCGATCAATA 410940
Query 42351 GACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGG 42410
| || |||| || || ||||| ||||| || || || || |||||||| | |
Sbjct 410941 GCGAGTAGGTTTCCGAGTGGATGTTCTCAATCATGATTTGGAAGCCATAGAAACAGCGCG 411000
Query 42411 CCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGT 42470
| || | | | || ||||| | | |||||||| | ||| ||||| || || ||||
Sbjct 411001 CTTCAGCAGCTTGCACTTCGTTGCTGAATCGTTCCAAGAGATTCTCGTTAACAATCCCGT 411060
Query 42471 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTT-AAT 42529
| ||| || |||||||||| ||||| | ||||| | | || | | ||| |||
Sbjct 411061 CCGAGGCCGCGAAAAACGCCAGCACATGACTGATAAAGTGTCGCTCAT-TGTCGTTCAAT 411119
Query 42530 TTATT---CCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGAT 42586
|| || |||||||| | ||| || || | || | |||||| | ||||| || ||
Sbjct 411120 TTGTTGTCCCAATCATGCAGATCCTTGGACAAGTCGATTTCTTCCGCAGTCCAGAAAGAA 411179
Query 42587 GCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAAT 42646
||||| ||||| || ||||| | ||| || ||||| ||| | || || || | ||||||
Sbjct 411180 GCTTCAGCCTTCTTGTACATTTGCCAAATCTCATGGTATCGGATGGGAAACAGTACAAAT 411239
Query 42647 C 42647
|
Sbjct 411240 C 411240
Score = 149 bits (164), Expect = 8e-31
Identities = 348/523 (67%), Gaps = 4/523 (1%)
Strand=Plus/Minus
Query 72097 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 72156
|||||| || || |||||| | | | || |||||||| || |||| ||| || ||
Sbjct 424845 TTCTTTCGGAGGTCAAGGAACTCGAACACGTCCGAATGCCAAGGCTCCAGGTAGATAGCA 424786
Query 72157 ATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 72216
| | | || || || ||||| || || ||||| | ||| | || ||||| ||| | ||
Sbjct 424785 AAAGCACCAGGACGCTTGTTGCCACCTTGATCGACGTAGCGTGCAGTGTTGTTAAACACA 424726
Query 72217 CTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTG 72276
| | ||| |||| ||| || ||| | |||||||| |||| || || || ||
Sbjct 424725 CGGAGCATAGGAACAATCCCGTTGCTAACGCCATTGGTACCGGCAATGTAAGAGCCCGTG 424666
Query 72277 GCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 72336
| || |||||| || | ||| ||||| || || |||| ||||| | || ||
Sbjct 424665 CCGCGGATATTGTGGATATGCAAACCGATTCCACCGGCGGTTTTCGAGATCATCGCACAA 424606
Query 72337 CGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAG 72396
||| | || ||||| ||||| || || ||| ||| |||| | | |||||
Sbjct 424605 GATTTGAGTGTGTCATAAATGCCTTCGATGGAATCGTCCTTCATCCCGACCAAGAAACAA 424546
Query 72397 CTAGACATTTGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 72454
||||||||| || || | ||||| ||||| |||| || ||||| || ||||| |
Sbjct 424545 GAAGACATTTGTGGATTCGGC--GTTCCAGCATTGAATAGAGTCGGAGATGCATGCGTGA 424488
Query 72455 ACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTA 72514
|| ||||| |||| | ||||| ||||| || || ||||| || || |
Sbjct 424487 ACGCCTTTTCGGACATCATGTTGTATGTCTCGATGGCGCTTTCTACGTCTTCGCCGTGGA 424428
Query 72515 TTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTT 72574
|||| || ||||||||||| | |||||| ||||| | ||| | | ||| || ||
Sbjct 424427 TTCCCACTGCGACACGCATCAGCATATGTTGAGGACGTTCGGCAACTTTGCCGTTGATAC 424368
Query 72575 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 72617
|| |||||||||| || | || || || |||||| ||||
Sbjct 424367 GCAGCAAGTAGGATCGCTCTAGTGTCTTGAAGCCAAAAAAGTT 424325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138788927240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |