Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq45 230 3e-55 >seq45 Length=461343 Score = 230 bits (254), Expect = 3e-55 Identities = 588/888 (66%), Gaps = 19/888 (2%) Strand=Plus/Minus Query 124987 GATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGG 125046 ||||| |||||||||||| | || ||||| |||||| |||||||||| |||||| | | Sbjct 411240 GATTTGTACTGTTTCCCATCCGATACCATGAGATTTGGCAAATGTACAAGAAGGCTGAAG 411181 Query 125047 CCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTC 125106 | || || ||||| | ||||| |||| |||||||||| ||| | |||||||| | Sbjct 411180 CTTCTTTCTGGACTGCGGAAGAAATCGACTTGTCCAAGGATCTGCATGATTGGGACAACA 411121 Query 125107 GTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCG 125166 |||| || | ||||||| | ||||| || | |||| || || || | ||| | Sbjct 411120 AATTGAACGACAATGAGCGACACTTTATCAGTCATGTGCTGGCGTTTTTCGCGGCCTCGG 411061 Query 125167 ATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGG 125226 | || || || ||||| ||||| ||| ||||||| | || || | | || | Sbjct 411060 ACGGGATTGTTAACGAGAATCTCTTGGAACGATTCAGCAACGAAGTGCAAGCTGCTGAAG 411001 Query 125227 TGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTA 125286 | || || || || ||||||||||||||||||||| | |||||||||| ||||| Sbjct 411000 CGCGCTGTTTCTATGGCTTCCAAATCATGATTGAGAACATCCACTCGGAAACCTACTCGC 410941 Query 125287 CACTGATTGACATGTACATTCGCGATCC---GCAACGTAAACACATGCTCTTTAACGCAA 125343 | |||| || | || || ||||| || |||||| | | | | || || || | Sbjct 410940 TATTGATCGATACCTATATCCGCGAGCCAGAGCAACG---AGAGTTCTTGTTCAATGCTA 410884 Query 125344 TCGACACGGTGCCGTCTA-TACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGAC 125402 | || ||| | || | || | |||| || | |||| | ||||||||| ||||| Sbjct 410883 TTGAAACGAT-CCCTGTAGTGAAACAAAAAGCAGAGTGGGCATTGCGGTGGATCAATGAC 410825 Query 125403 GACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTT 125462 | | |||| | || | || || ||||| || || || || || ||||| || Sbjct 410824 CAACGCGCCTCGTTTTCTGAACGTCTCGTAGCATTTGCTGCTGTGGAAGGGATCTTTTTC 410765 Query 125463 TCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACG 125522 ||||| ||||| | || || ||||| || ||||| ||| | ||||| ||||| | Sbjct 410764 TCGGGATCCTTTGCCTCGATTTTCTGGCTGAAAAAGCGTGGATTGATGCCGGGACTTTCC 410705 Query 125523 CACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTG 125582 | ||| || | || || ||||| || || | ||| ||||||||| | ||| Sbjct 410704 TTCTCTAATGAACTGATCTCGCGAGATGAAGGTTTGCACACCGACTTTGCCTGCTTGCTG 410645 Query 125583 TTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTA 125642 ||| || ||| | | ||||| | ||| || | ||||| | ||| | Sbjct 410644 TTTAGCCACTTGAAGAAAC----GTGCACACCCA-----GACACGGTCAACCGAATTATT 410594 Query 125643 ACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATT 125702 || || || || | || || ||| | ||| | | || || | || || |||| Sbjct 410593 ACGGAGGCTGTTGGCATCGAGCAAAACTTTTTGTCGGATGCCTTGCCAGTGTCGTTGATC 410534 Query 125703 GGCATGAACTGCAAG-CTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTA 125761 |||||||| |||||| || ||||| ||||||| || ||||| || |||||| | ||| Sbjct 410533 GGCATGAA-TGCAAGACTCATGTGTCAGTACATTGAATTTGTTGCGGATCGTTTGCTGGT 410475 Query 125762 CGAGTTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCAT 125821 | |||| | || ||| || || || | ||| |||||||| || ||| | ||| Sbjct 410474 GGCGTTGGGTAACCCGAAGCACTATAATGCTACGAACCCCTTTGACTTTATGGAGAACAT 410415 Query 125822 ATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTA 125869 || || | || || | |||||||||||| ||| ||| | || || Sbjct 410414 TTCGCTCCAAGGCAAATCGAACTTTTTCGAGCGGAAAGTCGGTGATTA 410367 Score = 105 bits (116), Expect = 1e-17 Identities = 334/513 (65%), Gaps = 10/513 (2%) Strand=Plus/Plus Query 96862 CACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAAC 96921 |||| ||||| || || ||||| || || || || ||| | || ||||| |||| | Sbjct 424743 CACGCTACGTCGATCAAGGTGGCAACAAGCGTCCTGGTGCTTTTGCTATCTACCTGGAGC 424802 Query 96922 CTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGG 96981 ||||||| ||||||| || || || | || | || || ||| || ||||| | Sbjct 424803 CTTGGCATTCGGACGTGTTCGAGTTCCTTGACCTCCGAAAGAACCACGGAAAAGAAGAAG 424862 Query 96982 CACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCA 97041 || || | ||||||||||||||| | ||| ||||||| ||||| ||| || ||| Sbjct 424863 TTCGCGCTCGCGACTTGTTTTATGCATTGTGGATGCCAGACTTGTTTATGCGTCGTGTCG 424922 Query 97042 ACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCT 97101 | | || ||| |||||| | ||||| || | | | || || | | ||||||| Sbjct 424923 AGCAGGGCGGCGACTGGACTTTGATGTGTCCTGCTGAGGCTCCAGGCTTAGCTGATTGCT 424982 Query 97102 GGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG----ATACGTG 97157 || || || || | ||| ||| | |||||| | |||| || | |||| Sbjct 424983 ACGGTGAGGAATTCAATGCCCTTTACGAGAGCTACGAAAAGCAGGGTCGTGGAAAACGT- 425041 Query 97158 AGACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGG 97216 ||| || | |||| |||| |||||| | || ||| | || ||| | ||||| || Sbjct 425042 --ACG-GTGAAGGCAC-AGAAGCTGTGGTATGCTATCCTCGAAGCACAGATCGAGACCGG 425097 Query 97217 AACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGG 97276 || | || || |||||||| ||| || || |||||||| || | || Sbjct 425098 CGGGCCTTTTATCCTATACAAGGACGCCGCCAACGAAAAGAGCAACCAGAAAAACATCGG 425157 Query 97277 CACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGAC 97336 |||||| |||||||| ||||| ||||| | || ||| || || ||||| || Sbjct 425158 GGTCATCAAATCATCCAATCTTTGCACAGAAATCATGGAATACAGTTCCCCAGACGAAAC 425217 Query 97337 GGCAGTTTGCGTTCTGGCATCGGTCAATCTGCC 97369 || |||||| |||| ||| || | |||| Sbjct 425218 CGCTGTTTGCAACTTGGCCTCGATCGCTTTGCC 425250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058746101240