Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq17 109 4e-19
>seq17
Length=3070003
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| |||| || | || || | |||||| || || || || || |||||||| |||||
Sbjct 1437806 CCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTG 1437747
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| ||||||| | |||||| || || | || | |||||||||||| |||
Sbjct 1437746 AGTGTTCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGA 1437687
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| || |||||||| || || ||| ||| |||| || ||||| | ||| ||
Sbjct 1437686 ATGCCCTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAACT 1437627
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || |||||||| || || |||| || || || || | |||||||
Sbjct 1437626 TCCAAAGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCATA 1437579
Score = 87.8 bits (96), Expect = 1e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213
||| | |||||| || || || || || |||||||| || || | | | |||| ||
Sbjct 1437561 AACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCACTCAAGGTACGTCCGTCCTC 1437502
Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273
| |||||| || || | || | |||||||||||| ||||| || ||||||||
Sbjct 1437501 AAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCCCTCTTTGTCTTG 1437442
Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
|| ||| ||| || |||| || ||||| | || || || || |||||||| ||
Sbjct 1437441 GATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACTTCCAAAGTAATGGTCTT 1437382
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT-AT-TTGAAAATAAAATTTTAA 15383
|| |||| || || || |||| |||||| || |||| || || |||||
Sbjct 1437381 GCCAGTCAATGTCTTCACGAAAACTTGCATGATAGTGAAGTTATAACTTTAA 1437330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362178983711109
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |