Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq45 185 1e-41 >seq45 Length=461343 Score = 185 bits (204), Expect = 1e-41 Identities = 404/601 (67%), Gaps = 8/601 (1%) Strand=Plus/Plus Query 33293 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGG 33352 |||||| ||| || || || ||| ||||| ||| || |||| || ||||| || | Sbjct 410641 TAAACAGCAAGCAGGCAAAGTCGGTGTGCAAACCTTCATCTCGCGAGATCAGTTCATTAG 410700 Query 33353 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATC 33412 | || | ||||| ||||| | ||||||||||| ||||| || || || || || |||| Sbjct 410701 AGAAGGAAAGTCCCGGCATCAATCCACGCTTTTTCAGCCAGAAAATCGAGGCAAAGGATC 410760 Query 33413 CAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC 33472 | || || ||||| ||||| || |||||||| || | || | || | | ||||| Sbjct 410761 CCGAGAAAAAGATCCCTTCCACAGCAGCAAATGCTACGAGACGTTCAGAAAACGAGGCGC 410820 Query 33473 T---GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 33529 ||||| |||||| ||||| || || || | ||| || ||| ||||||| Sbjct 410821 GTTGGTCATTGATCCACCGCAATGCCCACTCTGCTTTTTGTTTCACTACAGGGATCGTTT 410880 Query 33530 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 33589 | || ||||| || | | | | || | || | ||| ||||||||||| | Sbjct 410881 CAATAGCATTGAACAAGAACTCTCGTTGCTCTGGCTCGCGGATATAGGTATCGATCAATA 410940 Query 33590 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 33649 | || ||||||| || ||||| ||||| || || || || |||||||| | | Sbjct 410941 GCGAGTAGGTTTCCGAGTGGATGTTCTCAATCATGATTTGGAAGCCATAGAAACAGCGCG 411000 Query 33650 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGT 33709 | || | | || ||||| | | ||||||||| | ||| || || || || |||| Sbjct 411001 CTTCAGCAGCTTGCACTTCGTTGCTGAATCGTTCCAAGAGATTCTCGTTAACAATCCCGT 411060 Query 33710 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT 33768 | ||| || |||||||||| ||||| | ||||| | | || | || ||| | | Sbjct 411061 CCGAGGCCGCGAAAAACGCCAGCACATGACTGATAAAGTGTCGCTCAT-TGTCGTTCAAT 411119 Query 33769 TTATT---CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGAT 33825 || || |||||||| | ||| || || | || | ||||||| | ||||| || || Sbjct 411120 TTGTTGTCCCAATCATGCAGATCCTTGGACAAGTCGATTTCTTCCGCAGTCCAGAAAGAA 411179 Query 33826 GCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAAT 33885 || || ||||| || ||||| | ||| || |||| ||| |||| || || | |||||| Sbjct 411180 GCTTCAGCCTTCTTGTACATTTGCCAAATCTCATGGTATCGGATGGGAAACAGTACAAAT 411239 Query 33886 C 33886 | Sbjct 411240 C 411240 Score = 161 bits (178), Expect = 1e-34 Identities = 419/637 (66%), Gaps = 4/637 (1%) Strand=Plus/Minus Query 63177 TCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCA 63236 ||| | ||||||||||| | ||| || ||| | | || || || |||||| | || Sbjct 424959 TCAGCAGGACACATCAAAGTCCAGTCGCCGCCCTGCTCGACACGACGCATAAACAAGTCT 424900 Query 63237 GGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT 63296 || ||||| | || ||| | || | | | | ||| || ||||| |||||| Sbjct 424899 GGCATCCACAATGCATAAAACAAGTCGCGAGCGCGAACTTCTTCTTTTCCGTGGTTCTTT 424840 Query 63297 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACT 63356 || || |||||| | | | || |||||||| || |||| ||| || || | | | Sbjct 424839 CGGAGGTCAAGGAACTCGAACACGTCCGAATGCCAAGGCTCCAGGTAGATAGCAAAAGCA 424780 Query 63357 CCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 63416 ||||| || ||||| || || ||||| | ||| | || ||||| ||| | || | | | Sbjct 424779 CCAGGACGCTTGTTGCCACCTTGATCGACGTAGCGTGCAGTGTTGTTAAACACACGGAGC 424720 Query 63417 ATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGA 63476 || |||| ||| ||||| | ||||||||||||| || || || || | || Sbjct 424719 ATAGGAACAATCCCGTTGCTAACGCCATTGGTACCGGCAATGTAAGAGCCCGTGCCGCGG 424660 Query 63477 ATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT 63536 ||||| || | ||| ||||| || || |||| ||||| | || || ||| Sbjct 424659 ATATTGTGGATATGCAAACCGATTCCACCGGCGGTTTTCGAGATCATCGCACAAGATTTG 424600 Query 63537 AACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGAC 63596 | |||||||| || || || ||| ||| || |||| | | ||||| |||| Sbjct 424599 AGTGTGTCATAAATGCCTTCGATGGAATCGTCCTTCATCCCGACCAAGAAACAAGAAGAC 424540 Query 63597 ATTTGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 63654 ||||| || || | ||||| ||||| |||| || ||||| || ||||| ||| | Sbjct 424539 ATTTGTGGATTCGGC--GTTCCAGCATTGAATAGAGTCGGAGATGCATGCGTGAACGCCT 424482 Query 63655 TTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTA 63714 |||| || | | ||||| ||||| || || |||| || || ||||| | Sbjct 424481 TTTCGGACATCATGTTGTATGTCTCGATGGCGCTTTCTACGTCTTCGCCGTGGATTCCCA 424422 Query 63715 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 63774 ||||||||||||| | ||| || ||||| | ||| | | ||| ||| || || || Sbjct 424421 CTGCGACACGCATCAGCATATGTTGAGGACGTTCGGCAACTTTGCCGTTGATACGCAGCA 424362 Query 63775 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 63811 |||||||| || | || || || |||||| |||| Sbjct 424361 AGTAGGATCGCTCTAGTGTCTTGAAGCCAAAAAAGTT 424325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946818444840