Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq17 100 2e-16
seq45 93.3 4e-14
seq27 89.7 4e-13
>seq17
Length=3070003
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||||| || || || ||||| ||||| || | ||||| | ||||| || |
Sbjct 1437580 ATGCAAGTCTTCGTCAAGACATTGACTGGCAAGACCATTACTTTGGAAGTTGAATCTTCT 1437639
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || ||||| | || || ||||| |||||||| ||||| ||||| || |||
Sbjct 1437640 GATACGATCGAAAATGTTAAGGCTAAGATCCAAGACAAAGAGGGCATTCCTCCGGACCAA 1437699
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| | || || | | ||| || ||||||||||| | |||| ||||||| || |||
Sbjct 1437700 CAACGTCTTATCTTTGCCGGAAAACAACTCGAAGACGGAAGAACACTCAGCGACTACAAC 1437759
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
|| || || || ||||| ||||| | ||| || | || |||| |||
Sbjct 1437760 ATCCAGAAGGAGTCTACTCTTCATCTGGTGCTACGTCTGCGAGGCGGA 1437807
>seq45
Length=461343
Score = 93.3 bits (102), Expect = 4e-14
Identities = 165/239 (69%), Gaps = 4/239 (2%)
Strand=Plus/Minus
Query 133393 TTTAGATATCATGGCACAATCGTTGAGAGTTTTATAGATGCCATTGATGCTGTCTTCCTG 133452
||| || ||||| |||||| ||||| || | ||| ||||| | |||| || ||||
Sbjct 424624 TTTCGAGATCATCGCACAAGATTTGAGTGTGTCATAAATGCCTTCGATGGAATCGTCCTT 424565
Query 133453 GATGTTGAGCAAATAACACGACGACATCTGAGGCATTTTCATGCCAGAAGAAAACAAAGT 133512
|| || ||| |||| || ||||| || || | | | |||| | || | |||
Sbjct 424564 CATCCCGACCAAGAAACAAGAAGACATTTGTGGATTCGGCGTTCCAGCATTGAATAGAGT 424505
Query 133513 GGGACTAGCGTGAGTAAACAGCTTTGATCG--CATCAATCTGTAGGACTCAATTGCGCTT 133570
||| || || || ||| |||| ||| ||||| |||| | ||| || ||||||
Sbjct 424504 CGGAGATGCATGCGTGAACGCCTTT--TCGGACATCATGTTGTATGTCTCGATGGCGCTT 424447
Query 133571 TCAATGTCTTCACCATGAATTTGTAGCGCTACACGCATCAGCATATGTTGAGGTCGCTC 133629
|| | |||||| || || ||| | || ||||||||||||||||||||||| || ||
Sbjct 424446 TCTACGTCTTCGCCGTGGATTCCCACTGCGACACGCATCAGCATATGTTGAGGACGTTC 424388
Score = 84.2 bits (92), Expect = 2e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 105288 GTTCACGATGACGTCGGCAGCGGCAAAAAACGCGAGAACGTGCTTCAAAAAGAATCGTTC 105347
||| || || |||| | || || |||||||| || || || | | |||| ||| ||
Sbjct 411047 GTTAACAATCCCGTCCGAGGCCGCGAAAAACGCCAGCACATGACTGATAAAGTGTCGCTC 411106
Query 105348 TTTATCGTTCAGTTTGTTGTTCCAATCGTCAAAGTCTTTGGACATGTCGATTTCTTCAAC 105407
|| ||||||| |||||||| |||||| | | || ||||||| |||||||||||| |
Sbjct 411107 ATTGTCGTTCAATTTGTTGTCCCAATCATGCAGATCCTTGGACAAGTCGATTTCTTCCGC 411166
Query 105408 TTTCCAATGACAATCGAGCGCCTTTTTGTACGATTGCCAAA 105448
|||| | || | ||||| |||||| ||||||||
Sbjct 411167 AGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAAA 411207
>seq27
Length=1447875
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||||||||| || || || | || || || |||||||| | || || || ||
Sbjct 354330 ATGCAAGTGTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTTGAGGTGGAATCCTCT 354271
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| ||||| | ||||| |||||| ||||| ||||| || ||||| ||||||
Sbjct 354270 GACACGATCGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCAA 354211
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| || |||| | | || ||||| || ||||||| | | | ||||| || |||
Sbjct 354210 CAGCGATTGATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGTACTTTGAGCGACTACAAC 354151
Query 24171 ATTCAAAAAGAA 24182
|| || || |||
Sbjct 354150 ATCCAGAAGGAA 354139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935743247595
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |