Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq17 100 2e-16 seq45 93.3 4e-14 seq27 89.7 4e-13 >seq17 Length=3070003 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||||| || || || ||||| ||||| || | ||||| | ||||| || | Sbjct 1437580 ATGCAAGTCTTCGTCAAGACATTGACTGGCAAGACCATTACTTTGGAAGTTGAATCTTCT 1437639 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || ||||| | || || ||||| |||||||| ||||| ||||| || ||| Sbjct 1437640 GATACGATCGAAAATGTTAAGGCTAAGATCCAAGACAAAGAGGGCATTCCTCCGGACCAA 1437699 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | ||| || ||||||||||| | |||| ||||||| || ||| Sbjct 1437700 CAACGTCTTATCTTTGCCGGAAAACAACTCGAAGACGGAAGAACACTCAGCGACTACAAC 1437759 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || || || || ||||| ||||| | ||| || | || |||| ||| Sbjct 1437760 ATCCAGAAGGAGTCTACTCTTCATCTGGTGCTACGTCTGCGAGGCGGA 1437807 >seq45 Length=461343 Score = 93.3 bits (102), Expect = 4e-14 Identities = 165/239 (69%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 133393 TTTAGATATCATGGCACAATCGTTGAGAGTTTTATAGATGCCATTGATGCTGTCTTCCTG 133452 ||| || ||||| |||||| ||||| || | ||| ||||| | |||| || |||| Sbjct 424624 TTTCGAGATCATCGCACAAGATTTGAGTGTGTCATAAATGCCTTCGATGGAATCGTCCTT 424565 Query 133453 GATGTTGAGCAAATAACACGACGACATCTGAGGCATTTTCATGCCAGAAGAAAACAAAGT 133512 || || ||| |||| || ||||| || || | | | |||| | || | ||| Sbjct 424564 CATCCCGACCAAGAAACAAGAAGACATTTGTGGATTCGGCGTTCCAGCATTGAATAGAGT 424505 Query 133513 GGGACTAGCGTGAGTAAACAGCTTTGATCG--CATCAATCTGTAGGACTCAATTGCGCTT 133570 ||| || || || ||| |||| ||| ||||| |||| | ||| || |||||| Sbjct 424504 CGGAGATGCATGCGTGAACGCCTTT--TCGGACATCATGTTGTATGTCTCGATGGCGCTT 424447 Query 133571 TCAATGTCTTCACCATGAATTTGTAGCGCTACACGCATCAGCATATGTTGAGGTCGCTC 133629 || | |||||| || || ||| | || ||||||||||||||||||||||| || || Sbjct 424446 TCTACGTCTTCGCCGTGGATTCCCACTGCGACACGCATCAGCATATGTTGAGGACGTTC 424388 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 105288 GTTCACGATGACGTCGGCAGCGGCAAAAAACGCGAGAACGTGCTTCAAAAAGAATCGTTC 105347 ||| || || |||| | || || |||||||| || || || | | |||| ||| || Sbjct 411047 GTTAACAATCCCGTCCGAGGCCGCGAAAAACGCCAGCACATGACTGATAAAGTGTCGCTC 411106 Query 105348 TTTATCGTTCAGTTTGTTGTTCCAATCGTCAAAGTCTTTGGACATGTCGATTTCTTCAAC 105407 || ||||||| |||||||| |||||| | | || ||||||| |||||||||||| | Sbjct 411107 ATTGTCGTTCAATTTGTTGTCCCAATCATGCAGATCCTTGGACAAGTCGATTTCTTCCGC 411166 Query 105408 TTTCCAATGACAATCGAGCGCCTTTTTGTACGATTGCCAAA 105448 |||| | || | ||||| |||||| |||||||| Sbjct 411167 AGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAAA 411207 >seq27 Length=1447875 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||||||||| || || || | || || || |||||||| | || || || || Sbjct 354330 ATGCAAGTGTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTTGAGGTGGAATCCTCT 354271 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | ||||| |||||| ||||| ||||| || ||||| |||||| Sbjct 354270 GACACGATCGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCAA 354211 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | | || ||||| || ||||||| | | | ||||| || ||| Sbjct 354210 CAGCGATTGATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGTACTTTGAGCGACTACAAC 354151 Query 24171 ATTCAAAAAGAA 24182 || || || ||| Sbjct 354150 ATCCAGAAGGAA 354139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935743247595