Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq45 109 5e-19 seq27 107 2e-18 seq17 107 2e-18 >seq45 Length=461343 Score = 109 bits (120), Expect = 5e-19 Identities = 171/245 (70%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 || || ||||| ||||||||||| | |||||| |||| || | ||| ||| | ||| Sbjct 425817 TTTACCACCTGGAACTCGCCGGCAAGCACACGGCGCATGTAAATGTTGTTGGTGTACGGT 425758 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || | || || || ||||||||| ||| | || |||||||| ||| | | Sbjct 425757 TCGAAGCATTCATTGAAACCAAGGATTTGACTGGTAGAGGCAGTGGGCATCGGCGCTAGC 425698 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 || | || ||||||||||| |||| ||| | |||||||| | ||||||||| Sbjct 425697 AACAGCGAGTTGCGCAGGCCATGCTGAGCGATTTTCGCCTTTAGCAAAGACCAATCCCAA 425638 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || ||||| || || ||||| |||||||||||| || || | | || ||||| Sbjct 425637 AGATCCGTCGGTGTCTTGTTCCACAAGTCGTACTGCAAGATACCTTGGGATGCTGGGCTC 425578 Query 145298 CCTTG 145302 ||||| Sbjct 425577 CCTTG 425573 >seq27 Length=1447875 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || ||||| || || |||| ||||| || || |||||||| || |||||||||||| Sbjct 258032 CCGCCTCGCAATCGAAGTACTAGATGTAATGTAGATTCCTTTTGGATATTGTAATCGCTC 257973 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||||||||| || || || |||| | ||| || || ||||| ||| Sbjct 257972 AATGTACGACCGTCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGTTGATCCGGTGGG 257913 Query 131128 ATTCCTTCTTTGTC 131141 ||||||||||| || Sbjct 257912 ATTCCTTCTTTATC 257899 >seq17 Length=3070003 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | ||| | || |||||||| || |||||||| || ||| Sbjct 1437578 CCACCACGGAGTCGGAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCACTC 1437519 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| || || || || || |||| | ||| || ||||||||||| Sbjct 1437518 AAGGTACGTCCGTCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGA 1437459 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| ||| || ||||| | || | ||||| | ||||||| Sbjct 1437458 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACT 1437399 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | |||| ||| || || || | || || ||||||| ||||||| Sbjct 1437398 TCCAAAGTAATGGTCTTGCCAGTCAATGTCTTCACGAAAACTTGCATGA 1437350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012510892160