Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq34 127 1e-24
seq17 109 4e-19
seq38 95.1 8e-15
>seq34
Length=1084
Score = 127 bits (140), Expect = 1e-24
Identities = 84/93 (90%), Gaps = 5/93 (5%)
Strand=Plus/Minus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958
|||||||||| ||||||||||||||||||||||||||||||| || |||||||||
Sbjct 799 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTC 740
Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||| ||||||||||||||||||||||||||||
Sbjct 739 ATCCATTCATGCGCGTCACTAATTAGATGACGA 707
>seq17
Length=3070003
Score = 109 bits (120), Expect = 4e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168
|||| ||||||||| |||||| || || ||||| ||| ||| |||| |||| ||
Sbjct 1437560 ACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCACTCAAGGTACGTCCGTCCTCA 1437501
Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228
| ||||||||||||||| || || |||||||| || | || | ||| ||||||||
Sbjct 1437500 AGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCCCTCTTTGTCTTGG 1437441
Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288
|| || ||| || || | | ||||| | || ||||| || ||||| || ||
Sbjct 1437440 ATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACTTCCAAAGTAATGGTCTTG 1437381
Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCATG 38318
|| ||||| || |||||||| | ||||||
Sbjct 1437380 CCAGTCAATGTCTTCACGAAAACTTGCATG 1437351
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
|| |||| || ||| | ||||| ||||||||| |||||| || || ||||| ||
Sbjct 1437806 CCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTG 1437747
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | | |||| || | ||||||||||||||| || || |||||||| || | ||
Sbjct 1437746 AGTGTTCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGA 1437687
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||| |||||||| || || ||| ||||| | || ||||| | |||||||
Sbjct 1437686 ATGCCCTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAACT 1437627
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || ||||| || || || ||||| || || ||||| | |||||
Sbjct 1437626 TCCAAAGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCAT 1437580
>seq38
Length=944797
Score = 95.1 bits (104), Expect = 8e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 354628 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 354687
Query 20007 GGTAATATTTAGCCTTA 20023
||||||||| |||
Sbjct 354688 CCCGATATTTAGCTTTA 354704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946999973719
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |