Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq45 163 4e-35 >seq45 Length=461343 Score = 163 bits (180), Expect = 4e-35 Identities = 399/601 (66%), Gaps = 8/601 (1%) Strand=Plus/Plus Query 32650 TAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGG 32709 |||||| ||| || || || ||| ||| | ||| || |||| || | ||| || | Sbjct 410641 TAAACAGCAAGCAGGCAAAGTCGGTGTGCAAACCTTCATCTCGCGAGATCAGTTCATTAG 410700 Query 32710 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATC 32769 | || | ||||| ||||| | ||||||||||| ||||| || || || ||||| |||| Sbjct 410701 AGAAGGAAAGTCCCGGCATCAATCCACGCTTTTTCAGCCAGAAAATCGAGGCAAAGGATC 410760 Query 32770 CAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC 32829 | || || || || ||||| || || ||||| || | || | || | | ||||| Sbjct 410761 CCGAGAAAAAGATCCCTTCCACAGCAGCAAATGCTACGAGACGTTCAGAAAACGAGGCGC 410820 Query 32830 ---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 32886 ||||| |||||| ||||| || || || | ||| || ||| || || | Sbjct 410821 GTTGGTCATTGATCCACCGCAATGCCCACTCTGCTTTTTGTTTCACTACAGGGATCGTTT 410880 Query 32887 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 32946 | |||||||| || | | | | || | || | ||| ||||| ||||| | Sbjct 410881 CAATAGCATTGAACAAGAACTCTCGTTGCTCTGGCTCGCGGATATAGGTATCGATCAATA 410940 Query 32947 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAG 33006 | || ||||||| || ||||| ||||| ||||| || || ||||| || | | Sbjct 410941 GCGAGTAGGTTTCCGAGTGGATGTTCTCAATCATGATTTGGAAGCCATAGAAACAGCGCG 411000 Query 33007 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 33066 | || | | || ||||| | | |||||||| | ||| || || || || |||| Sbjct 411001 CTTCAGCAGCTTGCACTTCGTTGCTGAATCGTTCCAAGAGATTCTCGTTAACAATCCCGT 411060 Query 33067 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT 33125 | ||| || |||||||||| ||||| | ||||| | | || | || ||| | | Sbjct 411061 CCGAGGCCGCGAAAAACGCCAGCACATGACTGATAAAGTGTCGCTCAT-TGTCGTTCAAT 411119 Query 33126 TTATT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 33182 || || |||||||| | ||| || || | || | ||||||| | ||||| || || Sbjct 411120 TTGTTGTCCCAATCATGCAGATCCTTGGACAAGTCGATTTCTTCCGCAGTCCAGAAAGAA 411179 Query 33183 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAAT 33242 || || ||||| || ||||| | ||| || ||||| ||| | || ||||| | |||||| Sbjct 411180 GCTTCAGCCTTCTTGTACATTTGCCAAATCTCATGGTATCGGATGGGAAACAGTACAAAT 411239 Query 33243 C 33243 | Sbjct 411240 C 411240 Score = 143 bits (158), Expect = 3e-29 Identities = 415/637 (65%), Gaps = 4/637 (1%) Strand=Plus/Minus Query 63032 TCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCA 63091 ||| | ||||||||||| | ||| || ||| | | || || || |||||| | || Sbjct 424959 TCAGCAGGACACATCAAAGTCCAGTCGCCGCCCTGCTCGACACGACGCATAAACAAGTCT 424900 Query 63092 GGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT 63151 || ||||| | || ||| | || | | | | ||| || ||||| |||||| Sbjct 424899 GGCATCCACAATGCATAAAACAAGTCGCGAGCGCGAACTTCTTCTTTTCCGTGGTTCTTT 424840 Query 63152 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACT 63211 || || |||||| | | | || |||||||| || |||| ||| || || | | | Sbjct 424839 CGGAGGTCAAGGAACTCGAACACGTCCGAATGCCAAGGCTCCAGGTAGATAGCAAAAGCA 424780 Query 63212 CCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 63271 ||||| || ||||| || || ||||| | ||| | || ||||| ||| | || | | | Sbjct 424779 CCAGGACGCTTGTTGCCACCTTGATCGACGTAGCGTGCAGTGTTGTTAAACACACGGAGC 424720 Query 63272 ATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGA 63331 || |||| ||| || ||| |||||||| || | || || || || | || Sbjct 424719 ATAGGAACAATCCCGTTGCTAACGCCATTGGTACCGGCAATGTAAGAGCCCGTGCCGCGG 424660 Query 63332 ATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT 63391 ||||| || | ||| ||||| || || |||| ||||| | || || ||| Sbjct 424659 ATATTGTGGATATGCAAACCGATTCCACCGGCGGTTTTCGAGATCATCGCACAAGATTTG 424600 Query 63392 AACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGAC 63451 | || ||||| ||||| || || ||| ||| |||| | | ||||| |||| Sbjct 424599 AGTGTGTCATAAATGCCTTCGATGGAATCGTCCTTCATCCCGACCAAGAAACAAGAAGAC 424540 Query 63452 ATTTGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATT 63509 ||||| || || | ||||| ||||| |||| || ||||| || || || ||| | Sbjct 424539 ATTTGTGGATTCGGC--GTTCCAGCATTGAATAGAGTCGGAGATGCATGCGTGAACGCCT 424482 Query 63510 TTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTA 63569 |||| || | | ||||| ||||| || || |||| || || ||||| | Sbjct 424481 TTTCGGACATCATGTTGTATGTCTCGATGGCGCTTTCTACGTCTTCGCCGTGGATTCCCA 424422 Query 63570 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 63629 ||||||||||||| | ||| || ||||| | ||| | | ||| ||| || || || Sbjct 424421 CTGCGACACGCATCAGCATATGTTGAGGACGTTCGGCAACTTTGCCGTTGATACGCAGCA 424362 Query 63630 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 63666 |||||||| || | || || || |||||| |||| Sbjct 424361 AGTAGGATCGCTCTAGTGTCTTGAAGCCAAAAAAGTT 424325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631611900400