Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq38 98.7 9e-16 seq27 93.3 4e-14 >seq38 Length=944797 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||| | ||||| |||| || || | ||||| | || || || || Sbjct 90998 ATGCAAATCTTTATCAAGACACTGACTGGCAAGACGATCACGCTGGAGGTTGAATCCAGC 91057 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | ||||| | || ||| |||||||| || ||||| || ||||| Sbjct 91058 GACACGATCGATGTAGTGAAGTCCAAGGTTCAG-GACAAAGAGGGTATTCCTCCGGACCA 91116 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || ||| | ||||||||||| || ||| | ||||||| || || || | || ||||| Sbjct 91117 GCAACGGTTGATTTTTGCCGGAAAGCAACTGGAAGATGGCCGTACATTGAGTGACTACAA 91176 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| ||| ||| | || || ||||| Sbjct 91177 CATCCAAAAGGAAAGCACTTTGCACTTGGTGCT 91209 >seq27 Length=1447875 Score = 93.3 bits (102), Expect = 4e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 || |||||||| || ||||| || ||||| || |||| ||||| || ||||| |||| Sbjct 257899 GATAAAGAAGGAATCCCACCGGATCAACAACGTCTTATCTTTGCTGGTAAACAGCTAGAG 257958 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || | ||| || || ||||||||||||| ||||| ||||| || ||||| |||| || Sbjct 257959 GACGGTCGTACATTGAGCGATTACAATATCCAAAAGGAATCTACATTACATCTAGTACT 258017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327741221935