Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq27 116 3e-21
seq17 96.9 3e-15
>seq27
Length=1447875
Score = 116 bits (128), Expect = 3e-21
Identities = 175/254 (69%), Gaps = 26/254 (10%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||| | |||||||| || | ||||| || ||| ||||| | |||||||||| || |
Sbjct 257780 ATGCAAGTGTTTGTTAAGACGCTCACCGGGAAGACGATCACTTTGGAAGTGGAAAGCAGC 257839
Query 22279 GATACCGTGGACGAT---ATCAAACAA-----------------------AAAATTCAAG 22312
|||||| | || || | |||| | ||||| ||||
Sbjct 257840 GATACCATTGAAAATGGTAAGAAACGAGGAACTTACCGGCAGTGAAAACCAAAATACAAG 257899
Query 22313 ACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGG 22372
| || || || || ||||| ||||||||||||||||| ||||| || |||||| ||||||
Sbjct 257900 ATAAAGAAGGAATCCCACCGGATCAACAACGTCTTATCTTTGCTGGTAAACAGCTAGAGG 257959
Query 22373 ATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGC 22432
| || || | ||||||||| || ||||| ||||| || ||||| |||| | |
Sbjct 257960 ACGGTCGTACATTGAGCGATTACAATATCCAAAAGGAATCTACATTACATCTAGTACTTC 258019
Query 22433 GATTGCGCGGAGGT 22446
||||||| || |||
Sbjct 258020 GATTGCGAGGCGGT 258033
>seq17
Length=3070003
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||| |||| || || || || || || || || | ||| | ||||| || | |
Sbjct 1437352 ATGCAAGTTTTCGTGAAGACATTGACTGGCAAGACCATTACTTTGGAAGTCGAGTCTTCT 1437411
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | |||| || || |||||||| ||||| ||||| || || |||
Sbjct 1437412 GATACGATTGAAAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATTCCTCCGGACCAA 1437471
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||||||||| |||||||| ||||| | ||||| || ||| | || ||||||
Sbjct 1437472 CAACGTCTTATCTTTGCCGGAAAACAACTTGAGGACGGACGTACCTTGAGTGACTACAAC 1437531
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||| | ||| | ||| | || || |||
Sbjct 1437532 ATCCAGAAGGAGTCTACTCTTCATCTGGTTCTCCGACTCCGTGGTGGT 1437579
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||| | || || || || || || || || || | ||| | ||||| ||| | |
Sbjct 1437580 ATGCAAGTCTTCGTCAAGACATTGACTGGCAAGACCATTACTTTGGAAGTTGAATCTTCT 1437639
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || || || |||||||| ||||| ||||| || || |||
Sbjct 1437640 GATACGATCGAAAATGTTAAGGCTAAGATCCAAGACAAAGAGGGCATTCCTCCGGACCAA 1437699
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||||||||| |||||||| ||||| | || || | || || ||| ||||||
Sbjct 1437700 CAACGTCTTATCTTTGCCGGAAAACAACTCGAAGACGGAAGAACACTCAGCGACTACAAC 1437759
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || || ||
Sbjct 1437760 ATCCAGAAGGAGTCTAC 1437776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727749343685
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |