Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq27 116 3e-21 seq17 96.9 3e-15 >seq27 Length=1447875 Score = 116 bits (128), Expect = 3e-21 Identities = 175/254 (69%), Gaps = 26/254 (10%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | |||||||| || | ||||| || ||| ||||| | |||||||||| || | Sbjct 257780 ATGCAAGTGTTTGTTAAGACGCTCACCGGGAAGACGATCACTTTGGAAGTGGAAAGCAGC 257839 Query 22279 GATACCGTGGACGAT---ATCAAACAA-----------------------AAAATTCAAG 22312 |||||| | || || | |||| | ||||| |||| Sbjct 257840 GATACCATTGAAAATGGTAAGAAACGAGGAACTTACCGGCAGTGAAAACCAAAATACAAG 257899 Query 22313 ACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGG 22372 | || || || || ||||| ||||||||||||||||| ||||| || |||||| |||||| Sbjct 257900 ATAAAGAAGGAATCCCACCGGATCAACAACGTCTTATCTTTGCTGGTAAACAGCTAGAGG 257959 Query 22373 ATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGC 22432 | || || | ||||||||| || ||||| ||||| || ||||| |||| | | Sbjct 257960 ACGGTCGTACATTGAGCGATTACAATATCCAAAAGGAATCTACATTACATCTAGTACTTC 258019 Query 22433 GATTGCGCGGAGGT 22446 ||||||| || ||| Sbjct 258020 GATTGCGAGGCGGT 258033 >seq17 Length=3070003 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| |||| || || || || || || || || | ||| | ||||| || | | Sbjct 1437352 ATGCAAGTTTTCGTGAAGACATTGACTGGCAAGACCATTACTTTGGAAGTCGAGTCTTCT 1437411 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | |||| || || |||||||| ||||| ||||| || || ||| Sbjct 1437412 GATACGATTGAAAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATTCCTCCGGACCAA 1437471 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| |||||||| ||||| | ||||| || ||| | || |||||| Sbjct 1437472 CAACGTCTTATCTTTGCCGGAAAACAACTTGAGGACGGACGTACCTTGAGTGACTACAAC 1437531 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | ||| | ||| | ||| | || || ||| Sbjct 1437532 ATCCAGAAGGAGTCTACTCTTCATCTGGTTCTCCGACTCCGTGGTGGT 1437579 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || || || || || || || | ||| | ||||| ||| | | Sbjct 1437580 ATGCAAGTCTTCGTCAAGACATTGACTGGCAAGACCATTACTTTGGAAGTTGAATCTTCT 1437639 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || || || |||||||| ||||| ||||| || || ||| Sbjct 1437640 GATACGATCGAAAATGTTAAGGCTAAGATCCAAGACAAAGAGGGCATTCCTCCGGACCAA 1437699 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| |||||||| ||||| | || || | || || ||| |||||| Sbjct 1437700 CAACGTCTTATCTTTGCCGGAAAACAACTCGAAGACGGAAGAACACTCAGCGACTACAAC 1437759 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 1437760 ATCCAGAAGGAGTCTAC 1437776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727749343685