Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq17 129 5e-25 seq27 122 7e-23 seq38 105 6e-18 >seq17 Length=3070003 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| |||| | ||| | ||| | ||||| || || || |||||||| || Sbjct 1437581 ATACCACCACGGAGTCGGAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCA 1437522 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| ||||| || ||||||||||| || || |||| ||||| |||||||||||| Sbjct 1437521 CTCAAGGTACGTCCGTCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGA 1437462 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| |||||||| ||||| || | | ||||| || || | || ||| Sbjct 1437461 GGAATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCG 1437402 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | || ||||| |||| || || || |||| |||||| Sbjct 1437401 ACTTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTCACGAAAACTTGCATG 1437351 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || |||||||| ||||| | || | ||||| |||||||| || Sbjct 1437776 GTAGACTCCTTCTGGATGTTGTAGTCGCTGAGTGTTCTTCCGTCTTCGAGTTGTTTTCCG 1437717 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| ||||| |||||||||||||||||||| |||||||| ||||| || Sbjct 1437716 GCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCCCTCTTTGTCTTGGATCTTAGCCTTA 1437657 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||| | || || | ||||| || |||| || | || ||||| |||| || Sbjct 1437656 ACATTTTCGATCGTATCAGAAGATTCAACTTCCAAAGTAATGGTCTTGCCAGTCAATGTC 1437597 Query 114366 TTTACAAAAATCTGCAT 114382 || || || | ||||| Sbjct 1437596 TTGACGAAGACTTGCAT 1437580 >seq27 Length=1447875 Score = 122 bits (134), Expect = 7e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 114191 TTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTA 114250 ||| || || |||||||| ||||||| ||||||| |||||| || || |||||||| | Sbjct 354139 TTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGACCATCTTCCAGCTGCTTACCAGCAAA 354198 Query 114251 GATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG 114310 ||| | |||||||| ||||||||||| ||||| ||||| |||||| || | | Sbjct 354199 GATCAATCGCTGTTGATCCGGAGGAATACCTTCCTTGTCCTGGATCTTTGCCTTGACATT 354258 Query 114311 TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 ||| | ||||| | |||||| || || | ||| | ||| || || ||||| || || || Sbjct 354259 TTCGATCGTGTCAGAGGATTCCACCTCAAGGGTAATCGTCTTACCCGTCAGGGTCTTGAC 354318 Query 114371 AAAAATCTGCAT 114382 || | ||||| Sbjct 354319 GAACACTTGCAT 354330 Score = 109 bits (120), Expect = 5e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 |||||| || | || | |||| ||||| |||||||| ||||| || ||||||||||| Sbjct 258033 ACCGCCTCGCAATCGAAGTACTAGATGTAATGTAGATTCCTTTTGGATATTGTAATCGCT 257974 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||||| || || || ||||||||||| |||| ||||| ||||| ||||| || Sbjct 257973 CAATGTACGACCGTCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGTTGATCCGGTGG 257914 Query 114275 AATGCCTTCTTTGTC 114289 || |||||||| || Sbjct 257913 GATTCCTTCTTTATC 257899 >seq38 Length=944797 Score = 105 bits (116), Expect = 6e-18 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 114191 TTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTA 114250 ||| ||||| |||||||| || |||| ||||| |||||| ||||| || || || | Sbjct 91189 TTCCTTTTGGATGTTGTAGTCACTCAATGTACGGCCATCTTCCAGTTGCTTTCCGGCAAA 91130 Query 114251 GATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG 114310 || | || || |||||||||||||| || |||||||| || ||| || | Sbjct 91129 AATCAACCGTTGCTGGTCCGGAGGAATACCCTCTTTGTCCTGAACCTTGGACTTCACTAC 91070 Query 114311 TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 || | |||||| ||||||| || |||| || | ||| ||||| ||||| || || | Sbjct 91069 ATCGATCGTGTCGCTGGATTCAACCTCCAGCGTGATCGTCTTGCCAGTCAGTGTCTTGAT 91010 Query 114371 AAAAATCTGCATGGCT 114386 ||| || ||||||||| Sbjct 91009 AAAGATTTGCATGGCT 90994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134149100988