Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq17 114 3e-20 seq27 107 5e-18 seq38 95.1 3e-14 >seq17 Length=3070003 Score = 114 bits (126), Expect = 3e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | || || ||||||| || || || ||||| || |||||| Sbjct 1437807 TCCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 1437748 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | ||||||||| | ||||||||| || ||||| ||||| ||||| || Sbjct 1437747 GAGTGTTCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGG 1437688 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || ||||| || ||||| || || || || ||||| || | ||| ||||| || Sbjct 1437687 AATGCCCTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAAC 1437628 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| | || || ||||| || |||| ||||||||||| | ||||| Sbjct 1437627 TTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCAT 1437580 >seq27 Length=1447875 Score = 107 bits (118), Expect = 5e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 |||||||| || ||||| || |||||| | || || || ||||| | || || || Sbjct 354134 GTGCTTTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGACCATCTTCCAGCTGCTTACCA 354193 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396 || ||||||| ||||||||| || || ||||| || |||||||| || || || Sbjct 354194 GCAAAGATCAATCGCTGTTGATCCGGAGGAATACCTTCCTTGTCCTGGATCTTTGCCTTG 354253 Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || ||||| || | || ||||| || || || || |||||||| || ||||| ||| Sbjct 354254 ACATTTTCGATCGTGTCAGAGGATTCCACCTCAAGGGTAATCGTCTTACCCGTCAGGGTC 354313 Query 288457 TTGACGAATATCTGCAT 288473 |||||||| | ||||| Sbjct 354314 TTGACGAACACTTGCAT 354330 Score = 102 bits (112), Expect = 2e-16 Identities = 170/253 (67%), Gaps = 26/253 (10%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || | || |||||| ||||| | || ||| ||||||||||| || ||| Sbjct 258032 CCGCCTCGCAATCGAAGTACTAGATGTAATGTAGATTCCTTTTGGATATTGTAATCGCTC 257973 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || ||||| |||| ||||| || || ||||| ||||| |||||| |||| Sbjct 257972 AATGTACGACCGTCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGTTGATCCGGTGGG 257913 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCA--------------------------CGT 288400 |||||||||||||| || ||||| | ||||| | | Sbjct 257912 ATTCCTTCTTTATCTTGTATTTTGGTTTTCACTGCCGGTAAGTTCCTCGTTTCTTACCAT 257853 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 |||| || | |||||| ||| ||||| | ||||||||||||||||| || ||||| | Sbjct 257852 TTTCAATGGTATCGCTGCTTTCCACTTCCAAAGTGATCGTCTTCCCGGTGAGCGTCTTAA 257793 Query 288461 CGAATATCTGCAT 288473 | || | ||||| Sbjct 257792 CAAACACTTGCAT 257780 >seq38 Length=944797 Score = 95.1 bits (104), Expect = 3e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 |||||||| |||||||| || ||||| | || || || ||||| | ||| ||||| Sbjct 91194 GTGCTTTCCTTTTGGATGTTGTAGTCACTCAATGTACGGCCATCTTCCAGTTGCTTTCCG 91135 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396 || || |||| || || || || || || ||||| ||||| | || | ||| Sbjct 91134 GCAAAAATCAACCGTTGCTGGTCCGGAGGAATACCCTCTTTGTCCTGAACCTTGGACTTC 91075 Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||||| ||||| || || |||||||||||||| || ||||| ||| Sbjct 91074 ACTACATCGATCGTGTCGCTGGATTCAACCTCCAGCGTGATCGTCTTGCCAGTCAGTGTC 91015 Query 288457 TTGACGAATATCTGCAT 288473 |||| || || ||||| Sbjct 91014 TTGATAAAGATTTGCAT 90998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653659398222