Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq45 138 1e-27 seq17 104 2e-17 seq38 86.0 6e-12 seq27 82.4 7e-11 >seq45 Length=461343 Score = 138 bits (152), Expect = 1e-27 Identities = 323/480 (67%), Gaps = 8/480 (2%) Strand=Plus/Plus Query 123846 ATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGA 123905 || |||||| |||| | || || | ||| || ||| ||||| || ||| | Sbjct 425342 ATCATCGATATTAACTACTACCCAGTCGAGTCGGCTCGTCGTTCTAACATGCGCCACCGT 425401 Query 123906 CCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTAC 123965 ||| | || | || ||||||| |||||||| || || | || || || |||| | Sbjct 425402 CCGATTGGCATCGGTGTTCAAGGCTTGGCCGATGCATTCATGATCATGGGCTATCCGTTC 425461 Query 123966 GAAAGCGACGAAGCAAAGTTG-CTTAATACGCAAATAGCCGAAACAATTTATTACGGCGC 124024 || || | || ||| || | || ||| ||| || ||||||||||||| | | || Sbjct 425462 GATAGTCAAGAGGCAC-GTCGTCTGAATTTGCAGATCTTCGAAACAATTTATCATGCGGC 425520 Query 124025 TTTGGAGGCGAGCT-GCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCA 124083 |||||| || || | ||| | || || | | ||| | ||||||| ||| || | Sbjct 425521 TTTGGAA-CGCTCTTGTGAATTGGCTCAAGTCGAAGGCACATACGAAACCTACCAAGGGA 425579 Query 124084 GCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGT 124143 |||| || || |||||| |||||||||||| ||||||| |||||||| || | | Sbjct 425580 GCCCAGCATCCCAAGGTATCTTGCAGTACGACTTGTGGAACAAGACACCGACGGATCTTT 425639 Query 124144 GGGACTGGAGCGTTTTAAAACAACGCATATCGAC--GCACGGTTTGCGTAACTCGCTGTT 124201 |||| ||| | |||| || | |||| ||| || |||| ||||||||||| Sbjct 425640 GGGATTGGTCTTTGCTAAAGG--CGAAAATCGCTCAGCATGGCCTGCGCAACTCGCTGTT 425697 Query 124202 GGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGA 124261 | | ||| ||||| || || | || |||||| | || ||| |||| |||||| Sbjct 425698 GCTAGCGCCGATGCCCACTGCCTCTACCAGTCAAATCCTTGGTTTCAATGAATGCTTCGA 425757 Query 124262 GCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAA 124321 |||| ||| ||||| | ||| |||| || ||| | |||||||| || || ||| |||| Sbjct 425758 ACCGTACACCAACAACATTTACATGCGCCGTGTGCTTGCCGGCGAGTTCCAGGTGGTAAA 425817 >seq17 Length=3070003 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || || ||||| ||||| || || || Sbjct 1437581 ATACCACCACGGAGTCGGAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCA 1437522 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| || || | ||||||||| || | || | ||||| |||||||| Sbjct 1437521 CTCAAGGTACGTCCGTCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGA 1437462 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||| ||||| ||||| || || |||| ||| | || || ||||||||| Sbjct 1437461 GGAATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCG 1437402 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | ||||| || ||||| || | || || || |||| |||||| Sbjct 1437401 ACTTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTCACGAAAACTTGCAT 1437352 >seq38 Length=944797 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 45149 TTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTA 45208 |||||||||||| || || || || | || ||| |||| ||| ||||| || | Sbjct 91189 TTCCTTTTGGATGTTGTAGTCACTCAATGTACGGCCATCTTCCAGTTGCTTTCCGGCAAA 91130 Query 45209 TATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGC 45268 ||||| |||||||||||||| ||||| || ||||| || |||| || || | | Sbjct 91129 AATCAACCGTTGCTGGTCCGGAGGAATACCCTCTTTGTCCTGAACCTTGGACTTCACTAC 91070 Query 45269 TTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | |||||| || || || || || || | ||| ||||| || || || || | Sbjct 91069 ATCGATCGTGTCGCTGGATTCAACCTCCAGCGTGATCGTCTTGCCAGTCAGTGTCTTGAT 91010 Query 45329 AAAAATTTGCATCGC 45343 ||| |||||||| || Sbjct 91009 AAAGATTTGCATGGC 90995 >seq27 Length=1447875 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 |||||||| | || ||||||||||||||||| |||||||| | || | || || Sbjct 258014 ACTAGATGTAATGTAGATTCCTTTTGGATATTGTAATCGCTCAATGTACGACCGTCCTCT 257955 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||||| || || | || | ||||| || ||||| || || |||||||||||||| Sbjct 257954 AGCTGTTTACCAGCAAAGATAAGACGTTGTTGATCCGGTGGGATTCCTTCTTTATCTTGT 257895 Query 45252 ATTTT 45256 ||||| Sbjct 257894 ATTTT 257890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002923148040