Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq45 138 1e-27
seq17 104 2e-17
seq38 86.0 6e-12
seq27 82.4 7e-11
>seq45
Length=461343
Score = 138 bits (152), Expect = 1e-27
Identities = 323/480 (67%), Gaps = 8/480 (2%)
Strand=Plus/Plus
Query 123846 ATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGA 123905
|| |||||| |||| | || || | ||| || ||| ||||| || ||| |
Sbjct 425342 ATCATCGATATTAACTACTACCCAGTCGAGTCGGCTCGTCGTTCTAACATGCGCCACCGT 425401
Query 123906 CCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTAC 123965
||| | || | || ||||||| |||||||| || || | || || || |||| |
Sbjct 425402 CCGATTGGCATCGGTGTTCAAGGCTTGGCCGATGCATTCATGATCATGGGCTATCCGTTC 425461
Query 123966 GAAAGCGACGAAGCAAAGTTG-CTTAATACGCAAATAGCCGAAACAATTTATTACGGCGC 124024
|| || | || ||| || | || ||| ||| || ||||||||||||| | | ||
Sbjct 425462 GATAGTCAAGAGGCAC-GTCGTCTGAATTTGCAGATCTTCGAAACAATTTATCATGCGGC 425520
Query 124025 TTTGGAGGCGAGCT-GCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCA 124083
|||||| || || | ||| | || || | | ||| | ||||||| ||| || |
Sbjct 425521 TTTGGAA-CGCTCTTGTGAATTGGCTCAAGTCGAAGGCACATACGAAACCTACCAAGGGA 425579
Query 124084 GCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGT 124143
|||| || || |||||| |||||||||||| ||||||| |||||||| || | |
Sbjct 425580 GCCCAGCATCCCAAGGTATCTTGCAGTACGACTTGTGGAACAAGACACCGACGGATCTTT 425639
Query 124144 GGGACTGGAGCGTTTTAAAACAACGCATATCGAC--GCACGGTTTGCGTAACTCGCTGTT 124201
|||| ||| | |||| || | |||| ||| || |||| |||||||||||
Sbjct 425640 GGGATTGGTCTTTGCTAAAGG--CGAAAATCGCTCAGCATGGCCTGCGCAACTCGCTGTT 425697
Query 124202 GGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGA 124261
| | ||| ||||| || || | || |||||| | || ||| |||| ||||||
Sbjct 425698 GCTAGCGCCGATGCCCACTGCCTCTACCAGTCAAATCCTTGGTTTCAATGAATGCTTCGA 425757
Query 124262 GCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAA 124321
|||| ||| ||||| | ||| |||| || ||| | |||||||| || || ||| ||||
Sbjct 425758 ACCGTACACCAACAACATTTACATGCGCCGTGTGCTTGCCGGCGAGTTCCAGGTGGTAAA 425817
>seq17
Length=3070003
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || ||||| || || || ||||| ||||| || || ||
Sbjct 1437581 ATACCACCACGGAGTCGGAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCA 1437522
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| | ||| || || | ||||||||| || | || | ||||| ||||||||
Sbjct 1437521 CTCAAGGTACGTCCGTCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGA 1437462
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||| ||||| ||||| || || |||| ||| | || || |||||||||
Sbjct 1437461 GGAATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCG 1437402
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| | ||||| || ||||| || | || || || |||| ||||||
Sbjct 1437401 ACTTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTCACGAAAACTTGCAT 1437352
>seq38
Length=944797
Score = 86.0 bits (94), Expect = 6e-12
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 45149 TTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTA 45208
|||||||||||| || || || || | || ||| |||| ||| ||||| || |
Sbjct 91189 TTCCTTTTGGATGTTGTAGTCACTCAATGTACGGCCATCTTCCAGTTGCTTTCCGGCAAA 91130
Query 45209 TATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGC 45268
||||| |||||||||||||| ||||| || ||||| || |||| || || | |
Sbjct 91129 AATCAACCGTTGCTGGTCCGGAGGAATACCCTCTTTGTCCTGAACCTTGGACTTCACTAC 91070
Query 45269 TTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|| | |||||| || || || || || || | ||| ||||| || || || || |
Sbjct 91069 ATCGATCGTGTCGCTGGATTCAACCTCCAGCGTGATCGTCTTGCCAGTCAGTGTCTTGAT 91010
Query 45329 AAAAATTTGCATCGC 45343
||| |||||||| ||
Sbjct 91009 AAAGATTTGCATGGC 90995
>seq27
Length=1447875
Score = 82.4 bits (90), Expect = 7e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|||||||| | || ||||||||||||||||| |||||||| | || | || ||
Sbjct 258014 ACTAGATGTAATGTAGATTCCTTTTGGATATTGTAATCGCTCAATGTACGACCGTCCTCT 257955
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| ||||| || || | || | ||||| || ||||| || || ||||||||||||||
Sbjct 257954 AGCTGTTTACCAGCAAAGATAAGACGTTGTTGATCCGGTGGGATTCCTTCTTTATCTTGT 257895
Query 45252 ATTTT 45256
|||||
Sbjct 257894 ATTTT 257890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002923148040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |