Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq45 116 6e-21
>seq45
Length=461343
Score = 116 bits (128), Expect = 6e-21
Identities = 558/870 (64%), Gaps = 29/870 (3%)
Strand=Plus/Plus
Query 159644 ACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAAT 159703
|| ||| |||||||||||| | ||||| | | || || ||||| || | ||
Sbjct 410376 ACTTTCCGCTCGAAAAAGTTCGATTTGCCTTGGAGCGAAATGTTCTCCATAAAGTCAAAG 410435
Query 159704 GGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACA 159763
|||||| | | | |||| ||||||| || | ||| ||||||| | || || |||
Sbjct 410436 GGGTTCGTAGCATTATAGTGCTTCGGGTTACCCAACGCCACCAGCAAACGATCCGCAACA 410495
Query 159764 AATTCGATGTAGCTACACATCTG-CTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGC 159822
||||| ||||| |||||| | || || || || || | || | || || | ||
Sbjct 410496 AATTCAATGTACTGACACATGAGTCTTGCA-TTCATGCCGATCAACGACACTGGCAAGGC 410554
Query 159823 TTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGT-T 159881
||||||| ||| | | ||| || | || || || || | ||| | ||| ||| |
Sbjct 410555 ATCCGACAAAAAGTTTTGCTCGATGCCAACAGCCTCCGTAATAATTCGGTTGAC-CGTGT 410613
Query 159882 C---GTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGT 159938
| || | | || ||| |||| ||||||| | ||| ||||||||| ||
Sbjct 410614 CTGGGTGTGCACGTTTCTTCAA---GTGGC---TAAACAGCAAGCAGGCAAAGTCGGTGT 410667
Query 159939 GCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCAC 159998
||| || || || || ||||| | || || || | | || |||||||| | ||||
Sbjct 410668 GCAAACCTTCATCTCGCGAGATCAGTTCATTAGAGAAGGAAAGTCCCGGCATCAATCCAC 410727
Query 159999 GCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCG 160058
|| ||| ||||| ||||| | ||||| | || ||||||||||| ||||| || |
Sbjct 410728 GCTTTTTCAGCCAGAAAATCGAGGCAAAGGATCCCGAGAAAAAGATCCCTTCCACAGCAG 410787
Query 160059 CAAACGCCACGAGCCTCTCACCAAAAGAG--GCGTTGGTGTCATGGGTCCACCTTTTGGC 160116
|||| || ||||| | ||| ||| ||| |||||| ||||| | |||||| ||
Sbjct 410788 CAAATGCTACGAGACGTTCAGAAAACGAGGCGCGTTG--GTCATTGATCCACCGCAATGC 410845
Query 160117 CCATTCAGCCTTCT-TTGCGATGCACGGCATGCGCTCGACGGCGTTAAACA--ATCTGTC 160173
||| || || || | || | | || || || || | || || |||| | || ||
Sbjct 410846 CCACTCTGCTTTTTGTTTCACTACA-GGGATCGTTTCAATAGCATTGAACAAGAACTCTC 410904
Query 160174 -CTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCA 160232
||||| | || ||| ||| | |||| |||||| |||| | ||| |
Sbjct 410905 GTTGCTCTGGC---TCGCGGATATAGGTATCGATCAATAGCGAGTAGGTTTCCGAGTGGA 410961
Query 160233 CATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTC--CAGATACTGCACCTC 160290
|| || || || || ||| |||||| | ||| || ||| | ||||| ||
Sbjct 410962 TGTTCTCAATCATGATTTGGAAGCCATAGAAACAGCGCGCTTCAGCAGCT--TGCACTTC 411019
Query 160291 CTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGC 160350
| |||| | || ||||| | ||||| | |||||| | |||||| || || ||
Sbjct 411020 GTTGCTGAATCGTTCCAAGAGATTCTCGTTAACAATCCCGTCCGAGGCCGCGAAAAACGC 411079
Query 160351 CAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCAC 160410
|| ||| ||| ||| || |||| ||| | | ||| | | | || ||||| | ||
Sbjct 411080 CAGCACATGACTGATAAAGTGTCGCTCATTGTCGTTCAATTTGTTGTCCCAATCATGCAG 411139
Query 160411 GTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACAT 160470
|| | || ||| || | |||||||| |||| | ||| | ||| | ||||||||
Sbjct 411140 ATCCTTGGACAAGTCGATTTCTTCCGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACAT 411199
Query 160471 GGCCCAGATGGCGTGCTCTCTGATCGGAAA 160500
||| || | || | || ||| |||||
Sbjct 411200 TTGCCAAATCTCATGGTATCGGATGGGAAA 411229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154712967440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |