Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq45 221 1e-52 seq17 113 5e-20 seq27 98.7 1e-15 >seq45 Length=461343 Score = 221 bits (244), Expect = 1e-52 Identities = 584/881 (66%), Gaps = 13/881 (1%) Strand=Plus/Plus Query 132609 ATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCAT 132668 ||| || || || || ||| ||||| || | ||| || | | |||||| | ||| Sbjct 410366 ATAATCACCGACTTTCCGCTCGAAAAAGTTCGATTTGCCTTGGAGCGAAATGTTCTCCAT 410425 Query 132669 AAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCT 132728 ||| || |||||||| | | || |||||||| | | || | || |||| | Sbjct 410426 AAAGTCAAAGGGGTTCGTAGCATTATAGTGCTTCGGGTTACCCAACGCCACCAGCAAACG 410485 Query 132729 GTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACG-C 132786 || || || || || ||||| || ||||| || | ||| | | | || | || ||| | Sbjct 410486 ATCCGCAACAAATTCAATGTACTGACACATGAGTCTTGCATTCATG-CCGATCA-ACGAC 410543 Query 132787 ACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCC 132846 || |||| || || | | |||| |||||||||| | || || || || | ||| Sbjct 410544 ACTGGCAAGGCATCCGACAAAAAGTTTTGCTCGATGCCAACAGCCTCCGTAATAATTCGG 410603 Query 132847 CTAACGCGCGCCGCGCTCGGC-CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTC 132905 | || || | | | | || |||| | ||| || | |||| |||||| |||||||| Sbjct 410604 TTGAC-CGTGTCTGGGTGTGCACGTTTCTTCAAGTGGCTAAACAGCAAGCAGGCAAAGTC 410662 Query 132906 GCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAG 132965 | ||||| || || || | || || ||||| || ||| | | || ||||| | Sbjct 410663 GGTGTGCAAACCTTCATCTCGCGAGATCAGTTCATTAGAGAAGGAAAGTCCCGGCATCAA 410722 Query 132966 GCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGAC 133025 || || ||||| ||||| || || | ||| || ||||| || |||| || || || Sbjct 410723 TCCACGCTTTTTCAGCCAGAAAATCGAGGCAAAGGATCCCGAGAAAAAGATCCCTTCCAC 410782 Query 133026 GGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAG 133085 || || || || || || || || |||| ||| || | |||||| |||| Sbjct 410783 AGCAGCAAATGCTACGAGACGTTCAGAAAACGAGGCGCGTTGGTCATTGATCCACCGCAA 410842 Query 133086 CGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAG 133145 ||||| || || |||| ||| || || |||||||| || || || ||||| | | Sbjct 410843 TGCCCACTCTGCTTTTTGTTTCACTACAGGGATCGTTTCAATAGCATTGAACAA--GAAC 410900 Query 133146 TTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGT 133203 | || | | || ||| | ||||| ||||| | ||| || |||||||||| Sbjct 410901 TCTCGTTGCTCTGGCTCGCGGATATAGGTATCGATCAATAGCGAGTAGGTTTCCGAGTGG 410960 Query 133204 ACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCT 133263 | |||||| || |||||| ||||| || || || ||||| || | | |||||||| Sbjct 410961 ATGTTCTCAATCATGATTTGGAAGCCATAGAAACAGCGCGCTTCAGCAGCTTGCACTTCG 411020 Query 133264 TGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCC 133323 | ||| || || | ||||| ||||| || || ||||| ||| |||||||| ||| Sbjct 411021 TTGCTGAATCGTTCCAAGAGATTCTCGTTAACAATCCCGTCCGAGGCCGCGAAAAACGCC 411080 Query 133324 AGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA---GCGCTCCCAGTCGCGCGTG 133380 ||||| || |||| || || ||||| ||||||||||| | ||||| || || Sbjct 411081 AGCACATGACTGATAAAGTGTCGCTCATTGTCGTTCAATTTGTTGTCCCAATCATGCAGA 411140 Query 133381 TCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATA 133440 |||||||||| ||| | || || | ||||| || || || || || || |||||||| Sbjct 411141 TCCTTGGACAAGTCGATTTCTTCCGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATT 411200 Query 133441 CTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCG 133481 ||| || || ||| | |||||||| | ||||| || Sbjct 411201 TGCCAAATCTCATGGTATCGGATGGGAAACAGTACAAATCG 411241 >seq17 Length=3070003 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||| | ||||| || || | || ||||| ||||| || | || || || | | Sbjct 1437580 ATGCAAGTCTTCGTCAAGACATTGACTGGCAAGACCATTACTTTGGAAGTTGAATCTTCT 1437639 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | ||| |||| | || |||| ||||||||||| ||||| | |||||| Sbjct 1437640 GATACGATCGAAAATGTTAAGGCTAAGATCCAAGACAAAGAGGGCATTCCTCCGGACCAA 1437699 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | || || ||||| || || |||| | || |||| |||||||||| Sbjct 1437700 CAACGTCTTATCTTTGCCGGAAAACAACTCGAAGACGGAAGAACACTCAGCGACTACAAC 1437759 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || ||| ||||||| ||| || ||||||| Sbjct 1437760 ATCCAGAAGGAGTCTACTCTTCATCTGGTGCTACGTCTGCGAGGCGG 1437806 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||| | ||||| || || | || ||||| ||||| || | || |||||| | | Sbjct 1437352 ATGCAAGTTTTCGTGAAGACATTGACTGGCAAGACCATTACTTTGGAAGTCGAGTCTTCT 1437411 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | || ||||| | || | || |||| ||||||||||| ||||| | ||||| Sbjct 1437412 GATACGATTGAAAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATTCCTCCGGACCA 1437470 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || || || | || || ||||| || || |||| || ||| | | |||||||| Sbjct 1437471 ACAACGTCTTATCTTTGCCGGAAAACAACTTGAGGACGGACGTACCTTGAGTGACTACAA 1437530 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| | || || ||| |||| || || Sbjct 1437531 CATCCAGAAGGAGTCTACTCTTCATCTGGTTCTCCG 1437566 >seq27 Length=1447875 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||| | ||||| || || || ||||| || || || ||| | || || || || | Sbjct 354330 ATGCAAGTGTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTTGAGGTGGAATCCTCT 354271 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | || | ||| |||| ||||| || || ||||| | || ||| Sbjct 354270 GACACGATCGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCAA 354211 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | || || || |||||||| || | || || | | |||||||||| Sbjct 354210 CAGCGATTGATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGTACTTTGAGCGACTACAAC 354151 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| |||||| || |||| |||||||| ||| || | || || Sbjct 354150 ATCCAGAAGGAAAGCACTTTGCACTTGGTGCTCCGTCTGCGTGGTGG 354104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172493644160