Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq17 161 2e-34 seq27 152 1e-31 >seq17 Length=3070003 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || |||||||| ||||| || || || ||||| ||| || ||||| || |||||| Sbjct 1437788 ACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGTGTTCTTCCGTCTTCG 1437729 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || || || |||||||| ||||||||||| ||||||||||| ||||||||||| Sbjct 1437728 AGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCCCTCTTTGTCTTGG 1437669 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || || || || ||| ||| ||||| | |||| ||||| Sbjct 1437668 ATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAACTTCCAAAGTAATGGTCTTG 1437609 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || ||||| |||||||| Sbjct 1437608 CCAGTCAATGTCTTGACGAAGACTTGCAT 1437580 Score = 150 bits (166), Expect = 4e-31 Identities = 167/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTC 194980 ||||| | ||| || |||||||| ||||| || || || ||||| || |||| || | Sbjct 1437570 GAGTCGGAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCACTCAAG-GTAC 1437512 Query 194981 TCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTT 195040 || || || || || || || || |||||||| ||||||||||| ||||||||||| | Sbjct 1437511 GTCCGTCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCCCT 1437452 Query 195041 CTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGG 195100 |||||||||| || || ||||||||| ||||| || || ||| || ||||| | | Sbjct 1437451 CTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACTTCCAAAG 1437392 Query 195101 TAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| ||||| || ||||| || || ||||| |||||||| Sbjct 1437391 TAATGGTCTTGCCAGTCAATGTCTTCACGAAAACTTGCAT 1437352 >seq27 Length=1447875 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| | |||| || || || || ||||| ||| | ||| | |||||||| ||||| Sbjct 354127 GTGCAAAGTGCTTTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGACCATCTTCCAGCTG 354186 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || ||||| | ||| ||||| || |||||||| ||||| ||||| || || || Sbjct 354187 CTTACCAGCAAAGATCAATCGCTGTTGATCCGGAGGAATACCTTCCTTGTCCTGGATCTT 354246 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | |||||| || || || ||||| || |||||| |||||||||| |||||| || || Sbjct 354247 TGCCTTGACATTTTCGATCGTGTCAGAGGATTCCACCTCAAGGGTAATCGTCTTACCCGT 354306 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || |||||||||||||| Sbjct 354307 CAGGGTCTTGACGAACACTTGCAT 354330 Score = 87.8 bits (96), Expect = 4e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || || || ||||| |||||||||||| | || | || || || ||||| ||||| Sbjct 258002 GTAGATTCCTTTTGGATATTGTAATCGCTCAATGTACGACCGTCCTCTAGCTGTTTACCA 257943 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || |||||||| |||||||| || || || || |||||||| ||||| ||||| Sbjct 257942 GCAAAGATAAGACGTTGTTGATCCGGTGGGATTCCTTCTTTATCTTGTATTTT 257890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480903453583