Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq17 165 5e-35 seq27 109 4e-18 >seq17 Length=3070003 Score = 165 bits (182), Expect = 5e-35 Identities = 404/601 (67%), Gaps = 15/601 (2%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || || ||||||||||| |||||||| ||| ||||| || || |||||||||| Sbjct 467670 GCTATCGGTATTGATTTGGGAACTACCTACTCCTGTGTGGCCGTCTGGCAAAATGACCGC 467611 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || | || ||||| || |||||||| | || || |||||||||||| | || || Sbjct 467610 GTCGAGGTCATCGCCAACGATCAAGGTAACCGTACTACTCCATCATATGTTGCATTCACC 467551 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || ||||| | | | || || || ||||| || | |||| || || ||| ||| Sbjct 467550 GACACTGAGCGTTTGATCGGTGACGCTGCCAAGAACCAAGTGGCTATGAACCCTCATAAC 467491 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 ||| | ||||| || || | |||| ||||| || ||||| || | || ||| | Sbjct 467490 ACTGTGTTTGACGCCAAGCGTCTGATCGGTCGCAAGTTTGACGACTCTGAGGTGCAAGCC 467431 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCA--TATATAGAAG 474626 || ||| || |||||||| | || || | || |||||| ||| || | | Sbjct 467430 GACATGAAGCACTGGCCTTTCACTGTCATTGCTCGTGATGGTAAGCCAGTGATCCAAATC 467371 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 |||||| | ||||| | || || | || ||| || | || | ||||| | Sbjct 467370 GAATACAAG--GGTGAGAAGAAGACCTTCACTCCTGAAGAAGTCTCGGCTATGGTCCTCA 467313 Query 474687 CCAAAATGAAACAAACCG-CGAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAAT 474744 |||| ||| ||| || |||| | || ||||| || || || | || || || || Sbjct 467312 CCAAGATGCGTGAAATCGCCGAG-GCCTA-CTTGGGCAGCAACGTGAAGGACGCCGTTAT 467255 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 || || || ||||| || || ||||| ||||||||||| || || || || || || Sbjct 467254 CACCGTCCCTGCATACTTCAACGATTCGCAACGTCAAGCTACCAAGGACGCCGGTGTGAT 467195 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 || || | || || | ||||| || || || || || || ||||| ||||||| || Sbjct 467194 CGCTGGATTGAACGTGCTCCGTATCATCAACGAGCCGACTGCCGCCGCCATTGCTTACGG 467135 Query 474865 TCTTGATAAGAATTCTGA-CAA-AGAAGTAAATGTTTTAATCTTTGATT---GTGGAGGT 474919 ||| || || || || || ||| ||||| || ||||| ||||| || | |||| ||| Sbjct 467134 TCTCGACAAAAAGTCCGAGCAAGAGAAG--AACGTTTTGATCTTCGACTTGGGTGGTGGT 467077 Query 474920 A 474920 | Sbjct 467076 A 467076 Score = 104 bits (114), Expect = 2e-16 Identities = 158/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAGT 480610 || ||||| || || |||||||| ||| || || | || || || ||| || || Sbjct 1437800 CGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTC-GCTGAGTGT 1437742 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| ||||| ||||| ||||| ||||| |||||||||||||| || |||||||| || Sbjct 1437741 TCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCC 1437682 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 || |||||||| ||||| || ||| ||| || ||||||| | | || || ||| Sbjct 1437681 CTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAACTTCCAA 1437622 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || | ||||| ||||| | ||| Sbjct 1437621 -AGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTG 1437583 Score = 102 bits (112), Expect = 5e-16 Identities = 116/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || |||||||| ||||| ||||| |||||||||||||| || |||||||| || || ||| Sbjct 1437506 TCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCCCTCTTTG 1437447 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 ||||| ||||| ||||| |||||| ||||||| | | | || ||| ||||| Sbjct 1437446 TCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACTTCCAA-AGTAAT 1437388 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || | ||||| ||||||| ||| Sbjct 1437387 GGTCTTGCCAGTCAATGTCTTCACGAAAACTTG 1437355 >seq27 Length=1447875 Score = 109 bits (120), Expect = 4e-18 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || ||||| |||||||| || | || |||||||| |||||||| |||||||| Sbjct 354175 ATCTTCCAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGAGGAATACCTTCCTT 354234 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || |||||| |||||| ||| || || |||| | | ||||||||||| Sbjct 354235 GTCCTGGATCTTTGCCTTGACATTTTCGATCGTGTCAGAGGATTCCACCTCAAGGGTAAT 354294 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || || ||||| ||||| | ||| Sbjct 354295 CGTCTTACCCGTCAGGGTCTTGACGAACACTTG 354327 Score = 93.3 bits (102), Expect = 3e-13 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 474726 AAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAA 474785 |||| || | || || |||| || ||||| || || || ||| | |||||| |||| Sbjct 553203 AAGTGACGCACGCCGTTGTTACCGTGCCAGCCTACTTCAACGATGCGCAACGTACCGCAA 553262 Query 474786 CTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAG 474845 | ||||| || || | ||||| |||||| | ||| | ||||| | ||||| ||||| | Sbjct 553263 CCAAAGACGCAGGCACGATTGCCGGTCTTGAAGTTCTGCGTATCGTGAATGAGCCAACTG 553322 Query 474846 CAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 | || || | |||||||||||||| ||||| Sbjct 553323 CCGCGGCTATCGCTTATGGTCTTGACAAGAA 553353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268177098152252