Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq17 165 5e-35
seq27 109 4e-18
>seq17
Length=3070003
Score = 165 bits (182), Expect = 5e-35
Identities = 404/601 (67%), Gaps = 15/601 (2%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388
|| || ||||||||||| |||||||| ||| ||||| || || ||||||||||
Sbjct 467670 GCTATCGGTATTGATTTGGGAACTACCTACTCCTGTGTGGCCGTCTGGCAAAATGACCGC 467611
Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448
|| || | || ||||| || |||||||| | || || |||||||||||| | || ||
Sbjct 467610 GTCGAGGTCATCGCCAACGATCAAGGTAACCGTACTACTCCATCATATGTTGCATTCACC 467551
Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508
|| ||||| | | | || || || ||||| || | |||| || || ||| |||
Sbjct 467550 GACACTGAGCGTTTGATCGGTGACGCTGCCAAGAACCAAGTGGCTATGAACCCTCATAAC 467491
Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568
||| | ||||| || || | |||| ||||| || ||||| || | || ||| |
Sbjct 467490 ACTGTGTTTGACGCCAAGCGTCTGATCGGTCGCAAGTTTGACGACTCTGAGGTGCAAGCC 467431
Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCA--TATATAGAAG 474626
|| ||| || |||||||| | || || | || |||||| ||| || | |
Sbjct 467430 GACATGAAGCACTGGCCTTTCACTGTCATTGCTCGTGATGGTAAGCCAGTGATCCAAATC 467371
Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686
|||||| | ||||| | || || | || ||| || | || | ||||| |
Sbjct 467370 GAATACAAG--GGTGAGAAGAAGACCTTCACTCCTGAAGAAGTCTCGGCTATGGTCCTCA 467313
Query 474687 CCAAAATGAAACAAACCG-CGAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAAT 474744
|||| ||| ||| || |||| | || ||||| || || || | || || || ||
Sbjct 467312 CCAAGATGCGTGAAATCGCCGAG-GCCTA-CTTGGGCAGCAACGTGAAGGACGCCGTTAT 467255
Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804
|| || || ||||| || || ||||| ||||||||||| || || || || || ||
Sbjct 467254 CACCGTCCCTGCATACTTCAACGATTCGCAACGTCAAGCTACCAAGGACGCCGGTGTGAT 467195
Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864
|| || | || || | ||||| || || || || || || ||||| ||||||| ||
Sbjct 467194 CGCTGGATTGAACGTGCTCCGTATCATCAACGAGCCGACTGCCGCCGCCATTGCTTACGG 467135
Query 474865 TCTTGATAAGAATTCTGA-CAA-AGAAGTAAATGTTTTAATCTTTGATT---GTGGAGGT 474919
||| || || || || || ||| ||||| || ||||| ||||| || | |||| |||
Sbjct 467134 TCTCGACAAAAAGTCCGAGCAAGAGAAG--AACGTTTTGATCTTCGACTTGGGTGGTGGT 467077
Query 474920 A 474920
|
Sbjct 467076 A 467076
Score = 104 bits (114), Expect = 2e-16
Identities = 158/220 (72%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAGT 480610
|| ||||| || || |||||||| ||| || || | || || || ||| || ||
Sbjct 1437800 CGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTC-GCTGAGTGT 1437742
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
||| ||||| ||||| ||||| ||||| |||||||||||||| || |||||||| ||
Sbjct 1437741 TCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCC 1437682
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
|| |||||||| ||||| || ||| ||| || ||||||| | | || || |||
Sbjct 1437681 CTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAACTTCCAA 1437622
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||| || || || || | ||||| ||||| | |||
Sbjct 1437621 -AGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTG 1437583
Score = 102 bits (112), Expect = 5e-16
Identities = 116/153 (76%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677
|| |||||||| ||||| ||||| |||||||||||||| || |||||||| || || |||
Sbjct 1437506 TCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCCCTCTTTG 1437447
Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736
||||| ||||| ||||| |||||| ||||||| | | | || ||| |||||
Sbjct 1437446 TCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACTTCCAA-AGTAAT 1437388
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || | ||||| ||||||| |||
Sbjct 1437387 GGTCTTGCCAGTCAATGTCTTCACGAAAACTTG 1437355
>seq27
Length=1447875
Score = 109 bits (120), Expect = 4e-18
Identities = 116/153 (76%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
|||||| || ||||| |||||||| || | || |||||||| |||||||| ||||||||
Sbjct 354175 ATCTTCCAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGAGGAATACCTTCCTT 354234
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736
||| || |||||| |||||| ||| || || |||| | | |||||||||||
Sbjct 354235 GTCCTGGATCTTTGCCTTGACATTTTCGATCGTGTCAGAGGATTCCACCTCAAGGGTAAT 354294
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| ||||| || || ||||| ||||| | |||
Sbjct 354295 CGTCTTACCCGTCAGGGTCTTGACGAACACTTG 354327
Score = 93.3 bits (102), Expect = 3e-13
Identities = 111/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 474726 AAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAA 474785
|||| || | || || |||| || ||||| || || || ||| | |||||| ||||
Sbjct 553203 AAGTGACGCACGCCGTTGTTACCGTGCCAGCCTACTTCAACGATGCGCAACGTACCGCAA 553262
Query 474786 CTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAG 474845
| ||||| || || | ||||| |||||| | ||| | ||||| | ||||| ||||| |
Sbjct 553263 CCAAAGACGCAGGCACGATTGCCGGTCTTGAAGTTCTGCGTATCGTGAATGAGCCAACTG 553322
Query 474846 CAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876
| || || | |||||||||||||| |||||
Sbjct 553323 CCGCGGCTATCGCTTATGGTCTTGACAAGAA 553353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268177098152252
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |