Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq27 109 1e-18 seq17 100 5e-16 >seq27 Length=1447875 Score = 109 bits (120), Expect = 1e-18 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||| |||| |||||||||||| ||||| ||||||| || || ||||| || ||| Sbjct 258033 ACCGCCTCGCAATCGAAGTACTAGATGTAATGTAGATTCCTTTTGGATATTGTAATCGCT 257974 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 || || | | || |||| ||||| || ||||| || | | |||||||| || || Sbjct 257973 CAATGTACGACCGTCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGTTGATCCGGTGG 257914 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTT 193282 ||||||||||||||||||||||||||||| Sbjct 257913 GATTCCTTCTTTATCTTGTATTTTGGTTTT 257884 >seq17 Length=3070003 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | ||| || |||||||| | |||| ||| || || || ||||| Sbjct 1437581 ATACCACCACGGAGTCGGAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCA 1437522 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || | || || | ||||||||||||||| || | | ||||| || ||| Sbjct 1437521 CTCAAGGTACGTCCGTCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGA 1437462 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| ||||| || |||| || | ||| ||| ||||| |||||||| Sbjct 1437461 GGAATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCG 1437402 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| | ||| || || || || || | || || || || | |||||| Sbjct 1437401 ACTTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTCACGAAAACTTGCAT 1437352 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 || |||| || || || |||||||| | |||| ||| || || || |||||| Sbjct 1437806 CCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTG 1437747 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 | ||||| || || | ||||||||||||||| || | | ||||| || ||||| Sbjct 1437746 AGTGTTCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGA 1437687 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 || || ||||| ||||| || || | || | |||| || ||||| ||||| |||||| Sbjct 1437686 ATGCCCTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAACT 1437627 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || | ||| || || || || || | || || || || | |||||| Sbjct 1437626 TCCAAAGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCAT 1437580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899653848961680