Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq27 109 1e-18
seq17 100 5e-16
>seq27
Length=1447875
Score = 109 bits (120), Expect = 1e-18
Identities = 114/150 (76%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
||| |||| |||||||||||| ||||| ||||||| || || ||||| || |||
Sbjct 258033 ACCGCCTCGCAATCGAAGTACTAGATGTAATGTAGATTCCTTTTGGATATTGTAATCGCT 257974
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| || | | || |||| ||||| || ||||| || | | |||||||| || ||
Sbjct 257973 CAATGTACGACCGTCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGTTGATCCGGTGG 257914
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTT 193282
|||||||||||||||||||||||||||||
Sbjct 257913 GATTCCTTCTTTATCTTGTATTTTGGTTTT 257884
>seq17
Length=3070003
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | ||| || |||||||| | |||| ||| || || || |||||
Sbjct 1437581 ATACCACCACGGAGTCGGAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCA 1437522
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| || | || || | ||||||||||||||| || | | ||||| || |||
Sbjct 1437521 CTCAAGGTACGTCCGTCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGA 1437462
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || ||||| ||||| || |||| || | ||| ||| ||||| ||||||||
Sbjct 1437461 GGAATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCG 1437402
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| | ||| || || || || || | || || || || | ||||||
Sbjct 1437401 ACTTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTCACGAAAACTTGCAT 1437352
Score = 98.7 bits (108), Expect = 2e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193
|| |||| || || || |||||||| | |||| ||| || || || ||||||
Sbjct 1437806 CCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTG 1437747
Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253
| ||||| || || | ||||||||||||||| || | | ||||| || |||||
Sbjct 1437746 AGTGTTCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGA 1437687
Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313
|| || ||||| ||||| || || | || | |||| || ||||| ||||| ||||||
Sbjct 1437686 ATGCCCTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAACT 1437627
Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| | ||| || || || || || | || || || || | ||||||
Sbjct 1437626 TCCAAAGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCAT 1437580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899653848961680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |